DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6125 and slc26a4.3

DIOPT Version :9

Sequence 1:NP_732032.1 Gene:CG6125 / 41882 FlyBaseID:FBgn0038337 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_001107135.1 Gene:slc26a4.3 / 779605 XenbaseID:XB-GENE-950380 Length:778 Species:Xenopus tropicalis


Alignment Length:542 Identity:140/542 - (25%)
Similarity:255/542 - (47%) Gaps:99/542 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 KEAHWLVRRIF-FLSWITSYDREQAFA-DLIAGITLGLTIIPQSIAYAALAGLSSEYGLYSAFIG 137
            |:|:::|::.| .|.|:..|..::.|. |||:|::.||....|.:|:|.||.:...|||||:|..
 Frog    55 KKAYFIVKKFFPVLDWLPKYRWKEWFVNDLISGVSTGLVGTLQGLAFALLAAVPVGYGLYSSFFP 119

  Fly   138 SIIYVFFGTIPQVSIGPTSLMAIL----TLQFCADKP------------------------VQVV 174
            .:.|.|.||...:|:||..:::::    .|....|:.                        :.|.
 Frog   120 ILTYFFLGTSKHISVGPFPVVSLMVGSVVLSIAPDEKFAILGNATGLNKTIIDTVARDAARIAVS 184

  Fly   175 IVLAFLAGLVELAMGVFQLGFIVSFIPAPVTKAFTSGTALIVVFAQIKNLLGVRIKGFP------ 233
            ..|:||.|:::||:|:||:||||.::..|:...||:..|..|..:|.|.:|.|..:.:.      
 Frog   185 GTLSFLIGIIQLALGIFQIGFIVRYLADPLVGGFTTAAAFQVFVSQFKLVLNVPTQNYNGVLSII 249

  Fly   234 -SIGDFFTNIRPTDAAMGISCMVVLLSLRLLSQVN------FKQDTPVTRRLKKILWYISISRNA 291
             :|.|.|.|||.|:.|..|:.::..:...::.::|      |:...|:...:..:...||...|.
 Frog   250 YTIRDIFMNIRLTNIADLIAGLLTFVVCVVVKEINDRYKRIFRVPIPIEVIVTIVATGISYGVNL 314

  Fly   292 LVVFFTGLLVFIWVKKSSIEAVPFALSSKVSSAMPTIKLPPFAFEYQNRTYVFTDILHELGSGIV 356
            ...:..|::                      :.:|:..:||...:        ..:..::||...
 Frog   315 HAKYNAGIV----------------------ATIPSGFIPPMTPD--------VSLFSQIGSSAF 349

  Fly   357 VVPIVAVLANVAIAKAFVKDGN--LDASQEMLTLGLCNIAGSFFSAMPTCGAFTRSAVSQASGVR 419
            .:.|||....|::.|.:....|  :|.:||.:..|:.|:.|..||......|.:|:||.:::|.|
 Frog   350 SIGIVAYAVAVSVGKVYATKHNYEVDGNQEFIAFGISNLFGGAFSCFCATTALSRTAVQESTGGR 414

  Fly   420 TPMAGIYTGLIVLSALSILTPYFQYIPKASLSAVLIAAVIFMI-DLAPVKELWQTNKKDFFSWVG 483
            |.:|||.:..|||.|:..|....:.:.|:.|:|::||.:..|. .:..:..||:.||.|...||.
 Frog   415 TQIAGIISAGIVLIAIVALGRLLEPLQKSVLAAIVIANLKGMFWQVFDIPRLWKQNKWDSAIWVF 479

  Fly   484 SFIICLVAGVELGLLFGIVLSMVFILLR--------LGN-PKFEV--TLKQHESTYYVHIVPQ-- 535
            :.|..:..|::.|||.|::..:..||||        ||| |..::  .:|::::.    |.|:  
 Frog   480 TCIASIFLGLDSGLLAGLLFGLATILLRVQFPSCGALGNVPGTDIYKNVKEYKNL----IEPEGV 540

  Fly   536 ------SDVYYTGVDALRSELR 551
                  |.::|..:|..::.::
 Frog   541 KIIRHTSGMFYGNIDGFKNAIK 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6125NP_732032.1 sulP 87..620 CDD:273284 136/529 (26%)
HCO3_cotransp 108..462 CDD:304903 100/396 (25%)
STAS 530..608 CDD:294402 5/30 (17%)
slc26a4.3NP_001107135.1 sulP 66..723 CDD:273284 136/531 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000041
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X49
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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