Sequence 1: | NP_001189227.1 | Gene: | Rbp / 41880 | FlyBaseID: | FBgn0262483 | Length: | 1844 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009302494.1 | Gene: | rimbp2b / 563166 | ZFINID: | ZDB-GENE-040724-96 | Length: | 1723 | Species: | Danio rerio |
Alignment Length: | 1479 | Identity: | 346/1479 - (23%) |
---|---|---|---|
Similarity: | 532/1479 - (35%) | Gaps: | 507/1479 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 453 GLLDTGTLLGSTGLSGLGVGPSVGGITGATSLYGLSGGGGGAGGLGSSYGPPFLDVASSASYPFT 517
Fly 518 AAALRQASKMKMLDEIDIPLTRYNRSSPCSPIPPNNWGLDEFTDGLSVSMMHNRGGLALGALDLD 582
Fly 583 TRNHGLNGASEPQVDMLDIPGKGRCCVFIARFPYDPPDVHNEFLSMPCREAEGELSLCAGDYLLV 647
Fly 648 WTSGEPQGGYLDAELLDGRRGLVPASFVQRLVGDDLLEFHQAVLSTLRD--AEDGSMQCDTTSLP 710
Fly 711 S--LPPHNPLLTHTHEDLARLSETHTD----------------------------LEHDQDDI-S 744
Fly 745 DNVPAPKHLTLERQLNKSVLIGWSPPEPV-GYNLIDSYHVYVDGVLKVTVKANERTRALIEGVDS 808
Fly 809 T-RPHRISVRSVTQNRQTSRDAACTMIIGRDTAHLGPSAVRASHITCSSAVISWLPANSNHQHVV 872
Fly 873 CVNNVEVRTVKPGMYRHTITGLAPSTQYRVTVRAKHLRAVGQHAANVGQ---------TGGAGRP 928
Fly 929 GQEEAPGAYADFRTLTKGLPDPPQEIQLEAGPQDGTILVTWQPVNRPTST-------GPVTGYAV 986
Fly 987 YADGKKVTDINSPTGDHALIDIGKLGVFNPRAVTIRTKSRDSQSADSAPILIPNTV--------- 1042
Fly 1043 ---RNAVARRGPNQMGMGPQLPQ---GPHGM---------------------------------T 1068
Fly 1069 VQQQMGGMPGQPGQ---------------------------------------QG---------- 1084
Fly 1085 ---------------------------QHMMGGQQDHGQYDP----------------------- 1099
Fly 1100 -------------------------------NQMQQQQQ-------------------------- 1107
Fly 1108 -------------------------------------------QQGQPG------QPGHQ----- 1118
Fly 1119 ------------------------------------------PDAG-------SGLLG------G 1128
Fly 1129 LLGG----LFSKPTQNQVNQNGYQPGQPGAQRGMV-------------------PIPGRPQGPQQ 1170
Fly 1171 QQQQPYGPQGPMGGPRFRGPVPGQLNMQGQQMQGQMQGQMQGQMQGQMSGQMPGQMPGQMPG--- 1232
Fly 1233 ----QMPGQMAGQMAGQMPGQMPGQMPGQMSGQMPGQMMGPRGPLN--QQQQQQQQMQQGQMMPG 1291
Fly 1292 QQA-------GQQQAQPG-QPGQPGQMPGAQKKPRYFVAMFDYDPSTMSPNPDGCDEELPFQEGD 1348
Fly 1349 TIKVFGDKDADGFYWGELRGRRGYVPHNMVSEV----EDTTASMTAGGQMPGQMPGQMGQGQGVG 1409
Fly 1410 VGGTAQVMPGQGAPQQSMRNVSRD---RWGDIYANMPVKRMIALYDYDPQELSPNVD-------- 1463
Fly 1464 --AEQVELCFKTGEIILVYGDMDEDGFYMGELDGVRGLVPSNFLADAPD 1510 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rbp | NP_001189227.1 | SH3 | 609..677 | CDD:302595 | 29/67 (43%) |
FN3 | 748..822 | CDD:238020 | 31/75 (41%) | ||
FN3 | 844..907 | CDD:238020 | 25/62 (40%) | ||
SH3_RIM-BP_2 | 1319..1380 | CDD:212945 | 43/60 (72%) | ||
SH3_RIM-BP_3 | 1446..1507 | CDD:212946 | 41/70 (59%) | ||
rimbp2b | XP_009302494.1 | TPR_MLP1_2 | 103..207 | CDD:285204 | |
Prefoldin | 108..234 | CDD:238453 | |||
SPATA24 | 178..302 | CDD:291831 | 3/6 (50%) | ||
SH3_RIM-BP_1 | 414..474 | CDD:212947 | 30/75 (40%) | ||
FN3 | 667..731 | CDD:238020 | 25/63 (40%) | ||
SH3_RIM-BP_2 | 1491..1552 | CDD:212945 | 43/60 (72%) | ||
SH3_RIM-BP_3 | 1616..1687 | CDD:212946 | 41/70 (59%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 178 | 1.000 | Domainoid score | I3520 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 430 | 1.000 | Inparanoid score | I1699 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D102427at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003924 | |
OrthoInspector | 1 | 1.000 | - | - | otm24556 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_107254 | |
Panther | 1 | 1.100 | - | - | O | PTHR14234 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X2282 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
10 | 9.970 |