| Sequence 1: | NP_001189227.1 | Gene: | Rbp / 41880 | FlyBaseID: | FBgn0262483 | Length: | 1844 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038945054.1 | Gene: | Rimbp2 / 266780 | RGDID: | 708533 | Length: | 1360 | Species: | Rattus norvegicus |
| Alignment Length: | 1352 | Identity: | 365/1352 - (26%) |
|---|---|---|---|
| Similarity: | 522/1352 - (38%) | Gaps: | 438/1352 - (32%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 533 IDIPLTRYNRSSPCSPIPPNNWGLDEFTDGLSVSMMHNRGGLALGALDLDTRNHGLNGASEP-QV 596
Fly 597 DMLDIP-----------------------------------GKGRCCVFIARFPYDPPDVHNEFL 626
Fly 627 SMPCREAEGELSLCAGDYLLVWTSGEPQGGYLDAELLDGRRGLVPASFVQRLVGDDLLEFHQAVL 691
Fly 692 STLRDAEDGSMQCDTTSLPSLPPHNPLLTHTHEDLARLSETH-----------TD-----LEHDQ 740
Fly 741 DDI-SDNVPAPKHLTLERQLNKSVLIGWSPPE-PVGYNLIDSYHVYVDGVLKVTVKANERTRALI 803
Fly 804 EGVDSTR-PHRISVRSVTQNRQTSRDAACTMIIGRDTAHLGPSAVRASHITCSSAVISWLPANSN 867
Fly 868 HQHVVCVNNVEVRTVKPGMYRHTITGLAPSTQYRVTVRAKHLRAVGQHAANVGQTGGAGRPGQEE 932
Fly 933 APGAYADFRTLTKGLPDPPQEIQLEAGPQDGTILVTWQPVNRP--TSTG-----PVTGYAVYADG 990
Fly 991 KKVTDINSPTGDHALIDIGKLGVFNPRAVTIRTKSRDSQSADSAPILIPNTVRNAVARRGPNQMG 1055
Fly 1056 MGPQLP---------QGPHGMTVQQQMGGMPGQPGQQGQHMMGGQQDH----GQYDPNQMQQQQQ 1107
Fly 1108 QQGQP---------GQPGHQPDAGSGLLGGLLGGLF-----SKPTQNQVNQNGYQPGQ------- 1151
Fly 1152 -----PGAQRGMVP--IPG------------------------------------RPQGPQQQQ- 1172
Fly 1173 --------------QQPYGPQGP---------------------------MGGPRF-------RG 1189
Fly 1190 PVP---GQLNMQGQQMQGQMQG----------QMQGQMQGQMSGQMP--GQMPGQMPGQMPGQMA 1239
Fly 1240 GQMAGQMPGQMPGQMPGQMSGQMPGQMMGPRGPLNQQQQQQQQM--------------------- 1283
Fly 1284 ---------------------QQGQMMPGQQAGQQQAQP-------------------------- 1301
Fly 1302 --------GQPGQPGQM------------------------PGAQKKP-RYFVAMFDYDPSTMSP 1333
Fly 1334 NPDGCDEELPFQEGDTIKVFGDKDADGFYWGELRGRRGYVPHNMVSEV----EDTTASMTAGGQM 1394
Fly 1395 PGQMPGQMGQGQGVGVGGTAQVMPGQGAPQQSMRNVSRDRWGDIYANMPVKRMIALYDYDPQELS 1459
Fly 1460 PNVDAEQVELCFKTGEIILVYGDMDEDGFYMGELDGVRGLVPSNF-----------LADAPDQYN 1513
Fly 1514 NQMGPGGVAGRGGLSQRGRGQGPGARGPPP-------PPRDNMMPGMGGRGQ 1558 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Rbp | NP_001189227.1 | SH3 | 609..677 | CDD:302595 | 30/67 (45%) |
| FN3 | 748..822 | CDD:238020 | 32/75 (43%) | ||
| FN3 | 844..907 | CDD:238020 | 25/62 (40%) | ||
| SH3_RIM-BP_2 | 1319..1380 | CDD:212945 | 42/60 (70%) | ||
| SH3_RIM-BP_3 | 1446..1507 | CDD:212946 | 43/71 (61%) | ||
| Rimbp2 | XP_038945054.1 | HMMR_N | <4..88 | CDD:406356 | |
| SH3_RIM-BP_1 | 185..245 | CDD:212947 | 31/74 (42%) | ||
| FN3 | 314..395 | CDD:238020 | 33/81 (41%) | ||
| fn3 | 407..474 | CDD:394996 | 26/66 (39%) | ||
| FN3 | 501..587 | CDD:238020 | 32/88 (36%) | ||
| PHA03321 | <582..>728 | CDD:223041 | 35/152 (23%) | ||
| SH3_RIM-BP_2 | 1106..1167 | CDD:212945 | 42/60 (70%) | ||
| SH3_RIM-BP_3 | 1210..1270 | CDD:212946 | 42/60 (70%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C166341621 | |
| Domainoid | 1 | 1.000 | 190 | 1.000 | Domainoid score | I3177 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG3632 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D102427at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0003924 | |
| OrthoInspector | 1 | 1.000 | - | - | otm44753 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_107254 | |
| Panther | 1 | 1.100 | - | - | O | PTHR14234 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X2282 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 13 | 12.710 | |||||