| Sequence 1: | NP_001189227.1 | Gene: | Rbp / 41880 | FlyBaseID: | FBgn0262483 | Length: | 1844 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001380064.1 | Gene: | rimb-1 / 189724 | WormBaseID: | WBGene00006513 | Length: | 1276 | Species: | Caenorhabditis elegans |
| Alignment Length: | 1375 | Identity: | 355/1375 - (25%) |
|---|---|---|---|
| Similarity: | 500/1375 - (36%) | Gaps: | 468/1375 - (34%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 543 SSPCSPIPP---NNWGLDEFTDGLSVSMMHNRGGLALGALDLDTRNHGLNGASEPQVDMLDIPGK 604
Fly 605 GRCCVFIARFPYDPPDVHNEFLSMPCREAEGELSLCAGDYLLVWTSGE-PQGGYLDAELLDGRRG 668
Fly 669 LVPASFVQRLVGDDLLEFHQAVLSTLRDAEDGSMQCDTTSLP-SLPPHNPLLTH--THEDLARLS 730
Fly 731 E----------THTDLEHDQDDISDNVPAPKHLTLERQLNKSVLIGWSPPEPVGYNLIDSYHVYV 785
Fly 786 DGVLKVTVKANERTRALIEGVDSTRPHRISVRSVTQNRQTSRDAACTMIIGRDTAHLGPSAVRAS 850
Fly 851 HITCSSAVISWLPANSNHQHVVCVNNVEVRTVKPGMYRHTITGLAPSTQYRVTVRAKHLRAVGQH 915
Fly 916 AANVGQTGGAGRPGQEEAPGAYADFRTLTK-GLPDPPQEIQLEAGPQDGTILVTWQPVN---RPT 976
Fly 977 STGPVTGYAVYADGKKVTDINSPTGDHALIDIGKLGVFNPRAVTIRTKSRD-SQSADSAPILIPN 1040
Fly 1041 TVRNAV---ARRGPNQMGMGPQLP-QGPHGMTVQQQMGGMPGQPGQQ------------------ 1083
Fly 1084 ----GQH----------------MMGGQQDHGQYDP--------NQMQQQQQQQGQPGQP----- 1115
Fly 1116 ---GHQPDAGSGLLGGLLGGLFSKPTQNQVNQNGYQPGQPGAQRGMVPIPGRPQGPQQQQQQPYG 1177
Fly 1178 PQ----GPMGGPRFRGPVPGQLNMQGQQMQGQMQGQMQGQMQGQMSGQMPGQMPGQMPGQMPGQM 1238
Fly 1239 AGQMAGQMPGQMPGQMPGQMSGQMPGQMMGPRGPLNQQQQQQQQMQQGQMMPGQQAGQQQAQPGQ 1303
Fly 1304 PGQPGQMPGA--QKKPRYFVAMFDYDPSTMSPNPDGCDEELPFQEGDTIKVFGDKDADGFYWGEL 1366
Fly 1367 RGRRGYVPHNMVSEVED-------TTASMT--------------------------AG-GQMPGQ 1397
Fly 1398 MP--------------------------------------------------------------- 1399
Fly 1400 ----------------------------------------------------------------- 1399
Fly 1400 -----------------------------------GQMGQG---QG-------VGVGGTAQVMPG 1419
Fly 1420 QGAPQQSMRNVSRDRWGDIYANM-----------PVKRMIALYDYDPQELSPNVDAEQVELCFKT 1473
Fly 1474 GEIILVYGDMDEDGFYMGELDGVRGLVPSNFLADAPDQYNN--------------------QM-- 1516
Fly 1517 -----------GP-----GGVAG--------RGGLSQRGRGQGPGARGPPPPPRDNMMPGMGGRG 1557
Fly 1558 QPGKNARPAS 1567 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Rbp | NP_001189227.1 | SH3 | 609..677 | CDD:302595 | 28/68 (41%) |
| FN3 | 748..822 | CDD:238020 | 27/73 (37%) | ||
| FN3 | 844..907 | CDD:238020 | 28/62 (45%) | ||
| SH3_RIM-BP_2 | 1319..1380 | CDD:212945 | 32/60 (53%) | ||
| SH3_RIM-BP_3 | 1446..1507 | CDD:212946 | 46/60 (77%) | ||
| rimb-1 | NP_001380064.1 | SH3_RIM-BP_1 | 63..124 | CDD:212947 | 28/68 (41%) |
| fn3 | 285..348 | CDD:394996 | 27/62 (44%) | ||
| SH3_RIM-BP_2 | 763..823 | CDD:212945 | 32/60 (53%) | ||
| SH3_RIM-BP_3 | 1099..1160 | CDD:212946 | 46/62 (74%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C160159731 | |
| Domainoid | 1 | 1.000 | 200 | 1.000 | Domainoid score | I1774 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG3632 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 279 | 1.000 | Inparanoid score | I1767 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D102427at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0003924 | |
| OrthoInspector | 1 | 1.000 | - | - | oto17789 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_107254 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR14234 |
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R5407 |
| SonicParanoid | 1 | 1.000 | - | - | X2282 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 14 | 13.880 | |||||