Protein Alignment Rbp and si:ch211-105f12.2

DIOPT Version :10

• Sequence 1: NP_001189227.1
• Gene: Rbp / 41880
• FlyBaseID: FBgn0262483
• Length: 1844
• Species: Drosophila melanogaster
• Sequence 2: NP_001373182.1
• Gene: si:ch211-105f12.2 / 100000702
• ZFINID: ZDB-GENE-131127-333
• Length: 203
• Species: Danio rerio
• Alignment Length: 196
• Identity: 94/196 - (47%)
• Similarity: 119/196 - (60%)
• Gaps: 34/196 - (17%)

  Fly  1318 RYFVAMFDYDPSTMSPNPDGCDEELPFQEGDTIKVFGDKDADGFYWGELRGRRGYVPHNMVSE-- 1380
            |.|||:|.|:|:.|||||:..:|||||::|..|||:|||||||||.||...|.|:||.|||||
Zfish    36 RLFVALFSYNPALMSPNPETMEEELPFEQGQIIKVYGDKDADGFYNGETGTRCGFVPSNMVSEIP 100

  Fly  1381 VEDTTASMTAGGQMPGQMPGQMGQGQGVGVGGTAQVMPGQ--GAPQQSMRNVSRDRWGDIYANMP 1443
            |||            |::..::.| ||.....|..:.|.:  .||.           |:     .
Zfish   101 VED------------GEIKLRLIQ-QGFLPEETPSIAPSETSSAPD-----------GE-----K 136

  Fly  1444 VKRMIALYDYDPQELSPNVDAEQVELCFKTGEIILVYGDMDEDGFYMGELDGVRGLVPSNFLADA 1508
            |.||:|::||||.|.|||:|.|. ||.|:.|:||.|:|:||.||||.|:|.|.|||||||||...
Zfish   137 VHRMVAIFDYDPWESSPNIDIED-ELPFRAGDIIYVFGEMDCDGFYYGDLHGYRGLVPSNFLQPL 200

  Fly  1509 P 1509
            |
Zfish   201 P 201

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp	NP_001189227.1	COG4913	<69..>148	CDD:443941
		SH3	609..677	CDD:473055
		FN3	748..822	CDD:238020
		COG3979	844..>1004	CDD:443178
		FN3	844..907	CDD:238020
		Med15	<1050..>1272	CDD:312941
		SH3_RIM-BP_2	1319..1380	CDD:212945	38/60 (63%)
		SH3_RIM-BP_3	1446..1507	CDD:212946	39/60 (65%)
si:ch211-105f12.2	NP_001373182.1	SH3	37..98	CDD:473055	38/60 (63%)
		SH3	139..199	CDD:473055	39/60 (65%)