DRSC/TRiP Functional Genomics Resources

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Protein Alignment h-cup and Fgop2

DIOPT Version :10

Sequence 1:NP_650462.1 Gene:h-cup / 41879 FlyBaseID:FBgn0038334 Length:256 Species:Drosophila melanogaster
Sequence 2:XP_061518464.1 Gene:Fgop2 / 1280558 VectorBaseID:AGAMI1_008309 Length:329 Species:Anopheles gambiae


Alignment Length:285 Identity:65/285 - (22%)
Similarity:129/285 - (45%) Gaps:66/285 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LIKEYKDFAKCLDELEFKTDELLIDAKMVDQELANCHKFRED--------------QLLKHLTEK 63
            :|.:.|..|..|.:.|...|.||::::.|::.:.:..:|::|              ||:..:.::
Mosquito     8 IILDAKRIANRLKDREALGDALLLESESVNKHIESMRQFQDDIDILNKLARDRSNNQLITIIHQE 72

  Fly    64 NDDDEQMQLLRENIELKATGVEFQHGIELIMEKYREHSEGDML------IDTYQLREHYLAGLSK 122
            |....::|  :||..|||...:.||.:|.||.|||||::..:|      ::.: .|.|..|.:.:
Mosquito    73 NPQIREIQ--QENRLLKAALEDHQHALEHIMSKYREHTQAKILNTKVNFVEAF-TRHHRSADIER 134

  Fly   123 ---VVEEQDARIERMVDVMKLTVDFEDRSSAENQQIICQLTDENEQLRRQLQIS----------- 173
               ::.:|.|:|:.|..||:.....::....:.|:::.:|..||:.||..|:||           
Mosquito   135 RDELIRQQTAKIQEMAAVMQRVSQIDEEKMNQEQEVLSKLVTENKGLRELLEISRKYGSGGQKML 199

  Fly   174 ------TTD----------------ELFRQGALSSSESSTQIG---PNDSLDSSATRENSIYSID 213
                  .||                .|.:|..:::|.:||.:.   |:..:..::...::..|.|
Mosquito   200 VDDKSTQTDSYLLDGLIEAAVTARANLAKQTTVAASATSTSLASPQPSTVVAPASPGASATVSAD 264

  Fly   214 SFLSCLSPSSVE---DDSECSSNNS 235
            : ....:|.:.:   ||:..|.|:|
Mosquito   265 A-AGTTTPKATKTTNDDAARSPNSS 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
h-cupNP_650462.1 SIKE 12..173 CDD:461735 47/182 (26%)
Fgop2XP_061518464.1 None

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