DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34404 and Mcc

DIOPT Version :9

Sequence 1:NP_650457.2 Gene:CG34404 / 41873 FlyBaseID:FBgn0085433 Length:715 Species:Drosophila melanogaster
Sequence 2:XP_038952769.1 Gene:Mcc / 307449 RGDID:1561988 Length:1047 Species:Rattus norvegicus


Alignment Length:888 Identity:213/888 - (23%)
Similarity:369/888 - (41%) Gaps:264/888 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 GSSDLDSPEHTQRDTTESDNNISSC--STLDIVNKVEQLSVQQLENRVRDLTQRLQQAERQLTES 126
            |.|.|.......:..|:|.|..:|.  |.|::.:.:...::..|:..:.:|.:||||.||     
  Rat   188 GESSLPQQAVLHKLLTQSPNFGTSTGGSYLELASTLHLAALASLKGDIVELNKRLQQTER----- 247

  Fly   127 NTEREICHKRL------------------EVVSQAHECRITEMHCVIAELSKKLRSKQDHVIMEE 173
              ||::..|.|                  |..:..:|.||||:|.:||||:||:...|...|.||
  Rat   248 --ERDLLEKTLAKAQCEQSHLMREHEDVQERTTLRYEERITELHSIIAELNKKIDRLQGTTIREE 310

  Fly   174 QE-----------------------PDGSELSFQEG------------SVYNSEL---------- 193
            .|                       .|.:.:|..|.            |..||||          
  Rat   311 DEYSELRSELSQSQQEVNEDSRSVDQDQTSVSIPENQSTMVTADMDNCSDLNSELQRVLTGLESV 375

  Fly   194 ---------------------NLTNPDAECQ--TEPLEDFEGACSTTSVGNVAHKPPELSH-KGQ 234
                                 .||.....|.  .:.:|:.||........|:..   |.|. :.:
  Rat   376 VCGRKKSSCSLSVAEVDRHIEQLTTASEHCDLAIKTVEEIEGVLGRDLYPNLTE---ERSRWEKE 437

  Fly   235 VEALQEEVLHLRARIALLQSEISTKDA---AVVEEQTK-----VAFDCESEVNEC---GQRLNDL 288
            :..|:||...|.|.:...:.|::...|   |:.||:.:     :...|   ||:|   |..:.:|
  Rat   438 LAGLREENESLTAMLCSKEEELNRTKATMNAIREERDRLRRRIIVTTC---VNKCLRTGVYVREL 499

  Fly   289 NV------CTSLTSPQKRIPA---------------------VPKMAERVKL-RCASKHESGEDP 325
            ..      .|..:||.:..||                     :.|:|||||| :..|:..|.:.|
  Rat   500 QTRLQSVQATGPSSPGRLTPANRPINPSTGELSTSSSSNDIPIAKIAERVKLSKTRSESSSSDRP 564

  Fly   326 SQDTSLSNEQI--NLVEHLVSELKE--------QNLYMENFMEPLHLSK------DLERLQRRVE 374
            ...:.:|:..:  ::.|||...|::        |.||...  ..:..||      :.|||..|:|
  Rat   565 VLGSEISSVGVSSSVAEHLAHSLQDCSNIQEIFQTLYSHG--SAISESKIREFEVETERLNSRIE 627

  Fly   375 QLEMRNTMLALTLDECKEHTEHLYLLCGKYESNAVALQLALNCSDRAIEAYDVMLALLESKLALL 439
            .|:.:|.:|.:||:|||.:.|.:.:|.|||||||.||:|||..|::.||||:::|||.|::.:|:
  Rat   628 HLKSQNDLLTITLEECKSNAERMSMLVGKYESNATALRLALQYSEQCIEAYELLLALAETEQSLI 692

  Fly   440 -----------------GEKSVA-----AEESRRSVEAVARHLLARLDSE----KNVCENSLGPW 478
                             |::::.     |.:.|::.|..|:.||.:||..    ..|...|:.||
  Rat   693 LGQFRAAGVGSSPGDQSGDENITQMLKRAHDCRKTAENAAKALLMKLDGSCGGAFTVAGCSVQPW 757

  Fly   479 Q-----HNINLGPEDAPKTGRPWCADDDNRLRYHVSKLKGRRSNVQHTIVSLES----PFSDIYE 534
            :     .:.:.....|......:..:|:.||:.::.:||..|:.|:.|::.|||    |.|    
  Rat   758 ESLSSNSHTSTTSSTASSCDTEFTKEDEQRLKDYIQQLKNDRAAVKLTMLELESIHIDPLS---- 818

  Fly   535 RKRLALEKEHELRSADKKSPIDLETAVIMQEILELRDSNLQLKTKMEEAEQER---------QNA 590
                     ::::.......:|||.||:|||::.:::...:||.::...|:|:         :.|
  Rat   819 ---------YDVKPRGDSQRLDLENAVLMQELMAMKEEMAELKAQLYLLEKEKKALELKLSTREA 874

  Fly   591 NERVGILH-EALK---------QLQANNRVSYS-------EAEHAALTEQQLVE----------- 627
            .|:..::| |.||         ::::.:..|.|       |:..||.....|.|           
  Rat   875 QEQAYLVHIEHLKSEVEEQKEQRMRSLSSTSSSGKEKPGKESADAASPALSLAELRTNSDSELAT 939

  Fly   628 ----ALTRETELKGRIQTLLANVTASQKAFDEKYEQLHQNVRELQKSNHNLGQMLDHTKRKYQLR 688
                |:.||.:||.|:|.|::.:....|:.:.:::|..:.|.:|:::|.||....:..|:|:|.:
  Rat   940 EFANAIRREKKLKARVQELVSALERLTKSSEIRHQQSAEFVNDLKRANSNLVAAYEKAKKKHQNK 1004

  Fly   689 VRKLEQKIVDL----------------RLDYEQGHNHVPETTL 715
            ::|||.:::.:                .|:.|....|..||:|
  Rat  1005 LKKLESQMMAMVERHETQVRMLKQRIALLEEEHSRPHTNETSL 1047

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34404NP_650457.2 SCP-1 <99..599 CDD:114219 167/686 (24%)
MCC-bdg_PDZ 368..432 CDD:287477 33/63 (52%)
WXG100 609..696 CDD:295131 28/108 (26%)
MccXP_038952769.1 EF-hand_7 50..106 CDD:404394
SMC_prok_B <209..>473 CDD:274008 59/273 (22%)
MCC-bdg_PDZ 621..685 CDD:402230 33/63 (52%)
Smc <777..>1036 CDD:224117 60/271 (22%)
MCC-bdg_PDZ 950..1016 CDD:402230 18/65 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166354070
Domainoid 1 1.000 74 1.000 Domainoid score I8982
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 202 1.000 Inparanoid score I3687
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140333at33208
OrthoFinder 1 1.000 - - FOG0009302
OrthoInspector 1 1.000 - - oto96767
orthoMCL 1 0.900 - - OOG6_110033
Panther 1 1.100 - - LDO PTHR23347
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X7039
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.900

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