DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34404 and ushbp1

DIOPT Version :9

Sequence 1:NP_650457.2 Gene:CG34404 / 41873 FlyBaseID:FBgn0085433 Length:715 Species:Drosophila melanogaster
Sequence 2:XP_005155764.1 Gene:ushbp1 / 100148935 ZFINID:ZDB-GENE-121024-2 Length:649 Species:Danio rerio


Alignment Length:724 Identity:140/724 - (19%)
Similarity:257/724 - (35%) Gaps:211/724 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 TTESDNNISSCSTLDIVNKVEQLSVQQLENRVRDLTQRLQQAERQLTESNTEREICHKRLEVVSQ 142
            |..||:.:|..|.|           .|.|..|..|.|.:....|::......||:         :
Zfish     2 TERSDSLVSVDSEL-----------AQCETEVNTLLQIISDLNRKMDSLQIPREM---------K 46

  Fly   143 AHECRITEMHCVIAELSKKLRSKQDHVIMEEQEPDGSELSFQEGSVYNSEL-NLTNPDAECQT-- 204
            |.|..:....||   |.::.||....::..|..|...|....:....:||| |      ..||  
Zfish    47 ACESEVQVSGCV---LQQRPRSPACSLMSVETGPASVESVCGDSEGGSSELWN------RLQTLL 102

  Fly   205 EPLEDFEG------ACSTTSVGNVAHKPPELSHKGQVEA-------------------------- 237
            ..||...|      ...|.:|..::.|....:.:..|:|                          
Zfish   103 SALETSSGQGKKMLRLQTHNVEAISAKHLSAARESWVQATQVLEEMERDLGISYPSALPTDERRQ 167

  Fly   238 LQEEVLHLRARIALLQSEI-STKDAAVVEEQTKVAFDCESEVNECGQRLNDLN-------VCTSL 294
            .|.|||.|......|.:.: |.:|..:..|:|.|  |.|.|.....:::.||.       .|:..
Zfish   168 YQREVLSLYKHNQDLNASLKSRQDELMGAEKTLV--DLEDENKFLQEKVVDLKRKWLYGVSCSPP 230

  Fly   295 TSP-------------QKRIPAVPKMAERVKLRCASKHESGEDPSQDTSLSNEQINLVEHLVSEL 346
            .||             ....|..|.::.::.   :|:.:|...||...|:               
Zfish   231 VSPSLSSSRTSSPCFSSPSYPGSPLLSRKLP---SSRPDSPLPPSTIDSV--------------- 277

  Fly   347 KEQNLYMENFMEPLHLSKDLERLQRRVEQLEMRNTMLALTLDECKEHTEHLYLLCGKYESNAVAL 411
                           |..:.|::||.:|:|:.||..|:..|...|..:|.|.:...:.|:::.||
Zfish   278 ---------------LQAETEKMQRCLERLKARNERLSAALVRRKGESEQLSMSLSRQEADSSAL 327

  Fly   412 QLALNCSDRAIEAYDVMLALLESKLALLGEKSVAAEESRRSVEAVARHLLARLDSEKNVCENSLG 476
            .:||...:...|||..:|:|.|           |.::...:..:..:..|::...|.:.||:|..
Zfish   328 HMALAYCEECEEAYSDLLSLYE-----------ARKQQHAATNSTPQPDLSKSKEENSKCESSSP 381

  Fly   477 PWQHNINLGPEDA-PKT-GRPWCADDDNRLRYHVSKLKGRRSNV----------------QHTIV 523
            |      .|..|| |.: .:....|....:...:|:|:..|:.|                ..|:.
Zfish   382 P------EGAADARPNSLSKQEFEDKAGVITQRISRLQQDRAAVCIPQRGKAGEDKISPDTGTLA 440

  Fly   524 SLESPFSDIYERKRLALEKEHELRSADKKSPIDLETAVIMQEILELR-------------DSNLQ 575
            .:....|.:.:..:            ::|:.:..|...:.:|:.|:|             |.:|.
Zfish   441 GVRGRASSLSKNNK------------EEKAALRYELDTVREEMSEMRGNLRLLEKERRCLDMSLM 493

  Fly   576 LKTKMEEAEQ-----------ERQNANERVGILHEALKQLQANNRVSYSEAEHAALTEQQLVEAL 629
            :::..:.|..           ||:.|.:|..   |.|.:::....:. ....|:.|.|.|  .||
Zfish   494 VQSAQDSATSLILDSLRDELGERRAAQQRTA---ENLAKIEGGGGIP-GPRNHSILRELQ--AAL 552

  Fly   630 TRETELKGRIQTL-------LANVTASQKAFDEKYEQLHQNVRELQKSNHNLGQMLDHTKRKYQL 687
            .||..|:.|:.||       |.:.|.:::...|:..:|.:...::..:..:       :::|.:.
Zfish   553 QREQLLRTRVATLRESLDSALTDCTTNRRINREEIARLSRYYNKVSSTYRS-------SRKKQKE 610

  Fly   688 RVRKLEQKI 696
            ::.:||::|
Zfish   611 QLWRLEKQI 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34404NP_650457.2 SCP-1 <99..599 CDD:114219 112/597 (19%)
MCC-bdg_PDZ 368..432 CDD:287477 20/63 (32%)
WXG100 609..696 CDD:295131 19/93 (20%)
ushbp1XP_005155764.1 MCC-bdg_PDZ 284..348 CDD:287477 20/63 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596291
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23347
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.030

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