DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6171 and Aplf

DIOPT Version :10

Sequence 1:NP_001097801.1 Gene:CG6171 / 41872 FlyBaseID:FBgn0026737 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_001163960.1 Gene:Aplf / 72103 MGIID:1919353 Length:499 Species:Mus musculus


Alignment Length:252 Identity:80/252 - (31%)
Similarity:114/252 - (45%) Gaps:41/252 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ADSGAKRKSSEDITHNCNANFGAENGLRKRVKSEEPVASIKDETNPEVPMKIKAEPVENADEPTS 73
            ||......|||::..:.::|...:..: ..||:.:....|..|...|| .|.||......:|...
Mouse   259 ADQEGPGVSSENVPESSSSNIVKDPDV-DIVKTNKQKDGILIEELGEV-SKHKAATKPTTNEEGE 321

  Fly    74 TTPAIKIKAEP-ADNGNSPAAAMVKTEPTNSNAQDA------ADESTVSSSSIRTSCRFGIRCYR 131
            :...::.|:.| ...|..|.::...:.|...:...|      ::||.|.    ||:|.:|..|||
Mouse   322 SCARVQSKSPPEKSQGCHPESSSAPSSPDALHTDTADPVLGCSEESKVR----RTACMYGANCYR 382

  Fly   132 RNPAHRSAEAHPGDQDYRRPNFPAPPLGT--------PACPFGNACYRRNPVHFQDYSHPADFNS 188
            |||.|....:||||.||...:      ||        |.||:|.:|||:||.|..:|.|.|    
Mouse   383 RNPLHFQHFSHPGDSDYGEVH------GTDEGVIGDRPECPYGASCYRKNPQHKMEYRHSA---- 437

  Fly   189 AQNIRNRLRQRRAQRQNDDDSG--TDEEDEPFGGDNDRDADYRPGADINEDED-DEL 242
                   |..|.|..::|||.|  :|:|||......|.|:|:.||.|..|.|| |||
Mouse   438 -------LPARVALDEDDDDVGQPSDDEDEEDYEPTDEDSDWHPGKDDEEQEDVDEL 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6171NP_001097801.1 zf-CCHH 120..144 CDD:463043 12/23 (52%)
zf-CCHH 161..183 CDD:463043 11/21 (52%)
AplfNP_001163960.1 FHA_APLF 4..100 CDD:438769
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 134..183
KBM. /evidence=ECO:0000250|UniProtKB:Q8IW19 182..191
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..292 8/33 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 305..358 10/53 (19%)
zf-CCHH 371..395 CDD:463043 12/23 (52%)
Flexible linker. /evidence=ECO:0000250, ECO:0000250|UniProtKB:Q8IW19 401..411 2/15 (13%)
zf-CCHH 413..435 CDD:463043 11/21 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 440..499 22/48 (46%)
NAP1L motif. /evidence=ECO:0000250|UniProtKB:Q8IW19 463..487 10/23 (43%)
Blue background indicates that the domain is not in the aligned region.

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