DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trax and Tsnax

DIOPT Version :9

Sequence 1:NP_650454.2 Gene:Trax / 41871 FlyBaseID:FBgn0038327 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_071598.1 Gene:Tsnax / 64028 RGDID:621574 Length:290 Species:Rattus norvegicus


Alignment Length:284 Identity:100/284 - (35%)
Similarity:160/284 - (56%) Gaps:24/284 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KNGGAGHR----NTAPRKRQIPAAQLDEDSPIVQQFRIYSNELIMKHDRHERIVKLSRDITIESK 63
            |.|..|.|    :..|..::.........||::..|:.:..||..:||::||:||||||||:|||
  Rat     4 KEGPGGFRKRKHDNFPHNQRREGKDASSSSPVMLAFKSFQQELDTRHDKYERLVKLSRDITVESK 68

  Fly    64 RIIFLLHSIDSRKQNKEKVLEEARQRLNKLIAVNFRAVALELRDQDVYQFRSSYSPGLQEFIEAY 128
            |.|||||.|.| ..:.|::|.|:..:|:. :......||.||..:|::||..:.:.||||::||.
  Rat    69 RTIFLLHRITS-APDMEEILTESESKLDG-VRQKMLQVAQELSGEDMHQFHRAVTTGLQEYVEAV 131

  Fly   129 TYMEYLCHEDAEGENETKSVSDWQAIQAVMQYVEESS--QPKEEPTEGEDVQAIAQVESPKKFQF 191
            ::..::         .|:|:...:.|...:.:..:.|  :.|..|.:|:|.|.:.       ::.
  Rat   132 SFQHFI---------RTRSLISMEEINRQLTFTTDDSGKESKAPPADGQDKQLVT-------WRL 180

  Fly   192 FVDPTEYILGLSDLTGELMRRCINSLGSGDTDTCLDTCKALQHFYSGYISLNCQRARELWRKITT 256
            .:.|.:|:||::||||||||.||||:|:||.||..:..:.|:..|.|:..:......|:.:|:.|
  Rat   181 KITPVDYLLGVADLTGELMRMCINSVGNGDIDTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYT 245

  Fly   257 MKQSVLKAENVCYNVKVRGGEAAK 280
            :|||:.|.||.||.:||||.|..|
  Rat   246 LKQSLSKVENACYALKVRGSEIPK 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TraxNP_650454.2 Translin-like 37..267 CDD:271348 83/231 (36%)
TsnaxNP_071598.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34 5/29 (17%)
Translin-like 42..256 CDD:294622 83/231 (36%)
Interaction with C1D. /evidence=ECO:0000250 73..208 47/152 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335061
Domainoid 1 1.000 156 1.000 Domainoid score I4118
eggNOG 1 0.900 - - E1_COG2178
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4374
Inparanoid 1 1.050 176 1.000 Inparanoid score I3951
OMA 1 1.010 - - QHG55787
OrthoDB 1 1.010 - - D1213910at2759
OrthoFinder 1 1.000 - - FOG0006191
OrthoInspector 1 1.000 - - oto96061
orthoMCL 1 0.900 - - OOG6_105072
Panther 1 1.100 - - LDO PTHR10741
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4467
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.810

Return to query results.
Submit another query.