DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trax and Tsnax

DIOPT Version :9

Sequence 1:NP_650454.2 Gene:Trax / 41871 FlyBaseID:FBgn0038327 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_058605.1 Gene:Tsnax / 53424 MGIID:1855672 Length:290 Species:Mus musculus


Alignment Length:284 Identity:102/284 - (35%)
Similarity:162/284 - (57%) Gaps:24/284 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KNGGAGHR----NTAPRKRQIPAAQLDEDSPIVQQFRIYSNELIMKHDRHERIVKLSRDITIESK 63
            |.|..|.|    :|.|..::.........||::..|:.:..||..:||::||:||||||||:|||
Mouse     4 KEGPGGFRKRKHDTFPHNQRREGKDASLSSPVMLAFKSFQQELDARHDKYERLVKLSRDITVESK 68

  Fly    64 RIIFLLHSIDSRKQNKEKVLEEARQRLNKLIAVNFRAVALELRDQDVYQFRSSYSPGLQEFIEAY 128
            |.|||||.|.| ..:.|::|.|:..:|:. :......||.||..:|::||..:.:.||||::||.
Mouse    69 RTIFLLHRITS-APDMEEILTESESKLDG-VRQKILQVAQELSGEDMHQFHRAVTTGLQEYVEAV 131

  Fly   129 TYMEYLCHEDAEGENETKSVSDWQAIQAVMQYVEESS--QPKEEPTEGEDVQAIAQVESPKKFQF 191
            ::..::         :|:|:...:.|...:.:..|.|  :.|..|.||::.|.:.       ::.
Mouse   132 SFQHFI---------KTRSLISMEEINKQLTFTAEDSGKESKTPPAEGQEKQLVT-------WRL 180

  Fly   192 FVDPTEYILGLSDLTGELMRRCINSLGSGDTDTCLDTCKALQHFYSGYISLNCQRARELWRKITT 256
            .:.|.:|:||::||||||||.||||:|:||.||..:..:.|:..|.|:..:......|:.:|:.|
Mouse   181 KLTPVDYLLGVADLTGELMRMCINSVGNGDIDTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYT 245

  Fly   257 MKQSVLKAENVCYNVKVRGGEAAK 280
            :|||:.|.||.||.:||||.|..|
Mouse   246 LKQSLAKVENACYALKVRGSEIPK 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TraxNP_650454.2 Translin-like 37..267 CDD:271348 84/231 (36%)
TsnaxNP_058605.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31 6/26 (23%)
Translin-like 42..256 CDD:294622 84/231 (36%)
Interaction with C1D. /evidence=ECO:0000250 73..208 48/152 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831329
Domainoid 1 1.000 156 1.000 Domainoid score I4173
eggNOG 1 0.900 - - E1_COG2178
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4374
Inparanoid 1 1.050 176 1.000 Inparanoid score I4033
Isobase 1 0.950 - 1.056642 Normalized mean entropy S6820
OMA 1 1.010 - - QHG55787
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006191
OrthoInspector 1 1.000 - - oto92496
orthoMCL 1 0.900 - - OOG6_105072
Panther 1 1.100 - - LDO PTHR10741
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1561
SonicParanoid 1 1.000 - - X4467
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.740

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