DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trax and Trax

DIOPT Version :10

Sequence 1:NP_650454.2 Gene:Trax / 41871 FlyBaseID:FBgn0038327 Length:298 Species:Drosophila melanogaster
Sequence 2:XP_315244.5 Gene:Trax / 1275950 VectorBaseID:AGAMI1_007618 Length:317 Species:Anopheles gambiae


Alignment Length:316 Identity:142/316 - (44%)
Similarity:195/316 - (61%) Gaps:42/316 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GAGHRNTAPRKRQIPAAQLDEDSPIVQQFRIYSNELIMKHDRHERIVKLSRDITIESKRIIFLLH 70
            |..|.|.|          :||::||:|.||.|:..|..|||::|||||:||||||||||||||||
Mosquito    20 GRDHENVA----------VDENNPIIQCFREYATILDAKHDKYERIVKISRDITIESKRIIFLLH 74

  Fly    71 SIDSRKQNKEKVLEEARQRLNKLIAVNFRAVALELRDQDVYQFRSSYSPGLQEFIEAYTYMEYLC 135
            :||.||.|.:||..||:.||..:...:|..:|.||:|||.||:..:|:.|:||||||||:.||.|
Mosquito    75 TIDPRKNNLQKVCNEAKDRLEAIFRNHFVNIAKELKDQDPYQYTRAYTNGMQEFIEAYTFYEYSC 139

  Fly   136 HEDAEGENETKSVSDWQAIQAVMQYVEE------------SSQPKEEPTEGEDVQAIAQVES--- 185
                 |.|    :|.|.|||..:.|..:            :.:|..|||:.|..:.....|:   
Mosquito   140 -----GMN----ISHWDAIQKKLTYSSDQNVDSPSNARSIAEKPLNEPTDAEPDEQKRSNETTGE 195

  Fly   186 PKKFQFFVDPTEYILGLSDLTGELMRRCINSLGSGDTDTCLDTCKALQHFYSGYISLNCQRAREL 250
            ..|....:.|.:::|||.||:||:||.||||||||::::|...|:.:|..|.|::|:...|:|:.
Mosquito   196 TMKLTCLLHPQDFVLGLGDLSGEIMRTCINSLGSGNSESCFLHCRFMQELYKGFLSVTSIRSRDF 260

  Fly   251 WRKITTMKQSVLKAENVCYNVKVRGGEAAKWGAT-------FDQKPA-DEVDEGFY 298
            ..|:.|::||:||:|||||||.||||||||||.|       |..:|: |:.|||.|
Mosquito   261 SHKMMTLRQSLLKSENVCYNVTVRGGEAAKWGTTDETSGAMFQLQPSKDDDDEGVY 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TraxNP_650454.2 Translin-like 37..267 CDD:271348 107/244 (44%)
TraxXP_315244.5 None

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