DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cog2 and AT4G24840

DIOPT Version :10

Sequence 1:NP_524366.1 Gene:Cog2 / 41870 FlyBaseID:FBgn0026634 Length:710 Species:Drosophila melanogaster
Sequence 2:NP_567710.1 Gene:AT4G24840 / 828587 AraportID:AT4G24840 Length:756 Species:Arabidopsis thaliana


Alignment Length:753 Identity:205/753 - (27%)
Similarity:348/753 - (46%) Gaps:99/753 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 TAGSTSTAEK--------------LCFDKNEFMKANFSVDEFLHKNRNAPSLEQLRDNLGLYLKG 62
            |:.|.|:|.:              |.|..:.|:..||..:.::.:.|.....:.||..|..:|..
plant     7 TSPSPSSAPRSATDFFSDPYDSHPLWFKPSLFLSPNFDSESYISELRTFVPFDTLRSELRSHLAS 71

  Fly    63 LRAAMIDLINEDYADFVNLSANLVGLDQNIKTIQQPLEQFRSDIESIHGLIDENVTELRAQLEEK 127
            |...::||||.|||||||||..||.:|..:..::.||.:.|..|....|.::..:..||..|:::
plant    72 LNRELVDLINRDYADFVNLSTKLVDIDAAVVRMRAPLLELREKITGFRGSVEAALFALRNGLQQR 136

  Fly   128 RQLREFKRGLQSLKKVYETINKLQDLI-------------DRKLSGEQPI--------------- 164
            ......:..|:.|...:..::|::.||             |....|...:               
plant   137 SDAAAAREVLELLLDTFHVVSKVEKLIKVLPSTPSDWQNEDANSMGRSSMNDENSTQQDGTTMRE 201

  Fly   165 -KAVDLERAALDLIQLKFHEKHCFKHLS--PDHQGKIQQLEEQLHQHLRRFFNDALSQARNSAPE 226
             :::.|||.|.::.:|||:..|. ::|.  .:.:.:||.....|...|...|.|.|:   ||...
plant   202 TQSMLLERIASEMNRLKFYMAHA-QNLPFIENMEKRIQSASVLLDASLGHCFIDGLN---NSDTS 262

  Fly   227 SLERCLRIYITLNACDQAECAFREDVVAPYMTGVIGEQQLQN----SPQGLAGIYSKILNFISLH 287
            .|..|||.|..::..:.||..||..:|||::..:|..:...|    |...|...|.:|.:||:..
plant   263 VLYNCLRAYAAIDNTNAAEEIFRTTIVAPFIQKIITHETTTNAAGTSEDELENDYKQIKHFIAKD 327

  Fly   288 MTDLLRLTLYSDK--FPGFNFVVNSYWSDVETRLELHMNSIFAPGNSEVFYVKYKCTRDFLGKIE 350
            ...||.:: .:||  ...|:|:.||...:|...::......|:||....|...||.:.|||..:|
plant   328 CKMLLEIS-STDKSGLHVFDFLANSILKEVLWAIQKVKPGAFSPGRPTEFLKNYKASLDFLAYLE 391

  Fly   351 ELLTCSGEQAVTFYRQHKQTKSFEARWNLPVYFQICFQEIAGKFEAQL-EPVL-------QEDSL 407
            ..  |....|||.:|.......|..:||:.|||.:.||||||..::.| .|.|       :|.||
plant   392 GY--CPSRSAVTKFRAEAICVEFMKQWNVGVYFSLRFQEIAGALDSALTSPSLVFIQDSDKESSL 454

  Fly   408 KDNLTDSDYKISAFNAAKEAMTRCWAEGVYLPEVFPKFYKLNVQVVLRLSRWITDAITQSK---- 468
            ...|..||..:       |.:..||.|.|.:.....||.:|.:|::.|.|.|::.|:...|    
plant   455 NLILRQSDTLL-------ECLRSCWKEDVLVFSAADKFLRLTLQLLSRYSFWVSSALNNRKSNAS 512

  Fly   469 ---GSNFSKPYTRNQLLIALHADIRKLDA-----HLPELQQLIIKSVPVEQCTKIFSDVLAKSMS 525
               |..::...|....:..:| |:..|.:     :|..:.|.:..|     .|::. ||:..|:.
plant   513 PSPGCEWAVSATAEDFVYVIH-DVNCLVSEVCGDYLGHISQYLSSS-----STEVL-DVVRISIE 570

  Fly   526 CLADTLGAHLTNIQKTLVELLIGECETENVRQVNDLPRLYRKTNREVPTRCSSYVEQMLRPLKAF 590
            ....:|...|..:.||::::::.: ..|::||:..:...:|.||:.:|.|.|.||..:|||:|||
plant   571 QGGVSLEKVLPLLTKTIIDVIVDK-SVEDLRQLRGITATFRMTNKPLPVRHSPYVVGLLRPVKAF 634

  Fly   591 AQQNESQ--LGTLVVEQILAEVASHITKAYFNVVSDVLTSVQKTEESLRRLRN--VKSGGAATVS 651
            .:.::::  |.....|::|....|.||:.|:.:.:||::..:||:.||::||.  .:.||||  |
plant   635 LEGDKARNYLTQKTKEELLHGSVSEITRRYYELAADVVSVARKTQSSLQKLRQNAQRRGGAA--S 697

  Fly   652 TGSSAVMSDDDKIRVQLRVDVTSWRQELCKLNFQATQI 689
            ..|...:|:.||:.:||.:|:..:.:.:..|..:...|
plant   698 GVSDQNVSETDKMCMQLFLDIQEYGRNVSALGLKPADI 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cog2NP_524366.1 COG2 22..154 CDD:399271 38/131 (29%)
COG2_C 546..672 CDD:463434 43/129 (33%)
AT4G24840NP_567710.1 COG2 31..163 CDD:399271 38/131 (29%)
COG2_C 589..718 CDD:463434 43/131 (33%)

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