DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cog2 and Cog2

DIOPT Version :9

Sequence 1:NP_524366.1 Gene:Cog2 / 41870 FlyBaseID:FBgn0026634 Length:710 Species:Drosophila melanogaster
Sequence 2:XP_006255878.1 Gene:Cog2 / 690961 RGDID:1589822 Length:741 Species:Rattus norvegicus


Alignment Length:735 Identity:235/735 - (31%)
Similarity:387/735 - (52%) Gaps:78/735 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KKSAHLTAGSTSTAEKLCFDKNEFMKANFSVDEFLHKNRNAPSLEQLRDNLGLYLKGLRAAMIDL 70
            |:..:|..|    .:.|||||:||||.:|.||.|:...|....||:|||:|.||.|.|:.||::|
  Rat     3 KRRMNLPTG----PDTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAMVEL 63

  Fly    71 INEDYADFVNLSANLVGLDQNIKTIQQPLEQFRSDIESIHGLIDENVTELRAQLEEKRQLREFKR 135
            ||:|||||||||.||||:|:.:..:..||.|.|.::.|:...:.|.:..:..::.::..:|:.|.
  Rat    64 INKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGILAVEERMSKQDDIRKKKM 128

  Fly   136 GLQSLKKVYETINKLQDLIDRKLSGEQPIKAVD--------LERAALDLIQLKFHEKH-----CF 187
            .:..|.:|..::.|::.:::.:.|.:...:...        |||.|.:..||:||...     ..
  Rat   129 SVLRLIQVIRSVEKIEKILNSQSSKDASSQEASSPLLTGQVLERIATEFNQLQFHAVQSKGMPLL 193

  Fly   188 KHLSPDHQGKIQQLEEQLHQHLRRFFNDALSQARNSAPESLERCLRIYITLNACDQAECAFREDV 252
            ..:.|...|....|::.|...|       |...:.|..:.:..|||.|.|::....||....:.:
  Rat   194 DKVRPRIAGITAMLQQSLEGLL-------LEGLQTSNVDIIRHCLRTYATIDKTRDAEALVGQVL 251

  Fly   253 VAPYMTGVIGEQQLQNSPQGLAGIYSKILNFISLHMTDLLRLT---LYSDK---FPGFNFVVNSY 311
            |.||::.||.|:.:.:.|.||..:|:|:|.|:..|...|..:|   :.|:|   .||::|:|||.
  Rat   252 VKPYVSEVIVERVVDSHPSGLQLMYNKLLEFVPHHCRLLREVTGGAVSSEKGTIVPGYDFLVNSV 316

  Fly   312 WSDVETRLELHMNSIFAPGNSEVFYVKYKCTRDFLGKIEELLTCSGEQAVTFYRQHKQTKSFEAR 376
            |.::...||..:.|:|.||:.:.|:.||..:.||:.:.|.  .|..:.:|...|.|....||..:
  Rat   317 WPEIVGGLEEKLPSLFNPGDPDAFHQKYTVSMDFVRRFER--QCGSQASVKRLRAHPAYHSFSNK 379

  Fly   377 WNLPVYFQICFQEIAGKFEAQLEPVLQEDSLKDNLTDSDYKISAFNAAKEAMTRCWAEGVYLPEV 441
            |||||||||.|:|:||..||.|     .|.|:|....|.|.:.|.:....::::||::.::||.:
  Rat   380 WNLPVYFQIRFREVAGSLEASL-----TDGLEDAPAGSPYCLLASHRTWISLSKCWSDEMFLPLL 439

  Fly   442 FPKFYKLNVQVVLRLSRWITD----------------AITQSK------GSNFSK----PYTRNQ 480
            ..:.::|.:|::.|.|.::::                .:..||      ||:.|:    |.:..|
  Rat   440 AHRLWRLTLQILARFSVFVSELSVRPISNETAKETKKPLAGSKDPSDDHGSHPSEAGAVPISSTQ 504

  Fly   481 LLIALHADIRKLDAHLPELQQLI---IKSVPVEQCTKIFSDVLAKSMSCLADTLGAHLTNIQKTL 542
            |:..: :|:.:|...||:|.:.:   ::.|..:..:.| |..|..|.|.|:    ||:..:...:
  Rat   505 LVYVV-SDLGRLQEWLPDLLETVRLKLEMVGFKNFSSI-SAALEDSQSALS----AHVPALSSRI 563

  Fly   543 VELLIGECETENVRQVNDLPRLYRKTNREVPTRCSSYVEQMLRPLKAFAQQNESQLGTLVVEQIL 607
            |:.|...| ...::...::|||||:||:|||:..||||:..|:||......:..::...|:::.|
  Rat   564 VQDLSESC-FGYLKSALEVPRLYRRTNKEVPSTASSYVDSALKPLYQLQSGHGDKVQPAVMQRWL 627

  Fly   608 AEVASHITKAYFNVVSDVLTSVQKTEESLRRLRNVKSGGAATVSTGSSAVMSDDDKIRVQLRVDV 672
            .|..|..|..||..|||||:||:|.||||:||:..:. ..||....||..||||||||:||.:||
  Rat   628 QEALSDSTHKYFETVSDVLSSVRKMEESLKRLKQARR-SPATNPVSSSGGMSDDDKIRLQLALDV 691

  Fly   673 TSWRQEL----CKLNFQATQ 688
            ....:::    .:...||:|
  Rat   692 EHLGEQVPATRARFEGQASQ 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cog2NP_524366.1 COG2 22..154 CDD:283743 54/131 (41%)
DUF3510 546..672 CDD:288845 54/125 (43%)
Cog2XP_006255878.1 COG2 15..147 CDD:283743 53/131 (40%)
DUF3510 566..691 CDD:288845 51/124 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342169
Domainoid 1 1.000 152 1.000 Domainoid score I4237
eggNOG 1 0.900 - - E1_KOG2307
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7206
Inparanoid 1 1.050 353 1.000 Inparanoid score I2191
OMA 1 1.010 - - QHG55570
OrthoDB 1 1.010 - - D190117at2759
OrthoFinder 1 1.000 - - FOG0006036
OrthoInspector 1 1.000 - - oto96886
orthoMCL 1 0.900 - - OOG6_102642
Panther 1 1.100 - - LDO PTHR12961
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4329
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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