DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hibch and fadJ

DIOPT Version :10

Sequence 1:NP_732020.2 Gene:Hibch / 41869 FlyBaseID:FBgn0038326 Length:386 Species:Drosophila melanogaster
Sequence 2:NP_416843.1 Gene:fadJ / 949097 ECOCYCID:G7212 Length:714 Species:Escherichia coli


Alignment Length:235 Identity:66/235 - (28%)
Similarity:105/235 - (44%) Gaps:24/235 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 VRQSSSSVLATESSNKGMIILNRP-KALNAINLE---MVRKIYKHLKKCEKSKSLVIIKGTGDKA 100
            :..:|:..|.....|..:|.::.| :.:|.:..|   .||.|.|.|::.::.:.:|.:....|. 
E. coli     1 MEMTSAFTLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDN- 64

  Fly   101 FCAGGDVRALVEAGPTDESKSFFREEYSTNALIGNYKIPYIAIIDGITMGGG--VGLSVHGKYRV 163
            |.||.|:..:.......|:::..|:.....|.|....|..||.|.|..:|||  :.|:.||:...
E. coli    65 FIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIQVIAAIHGACLGGGLELALACHGRVCT 129

  Fly   164 ASDRTLFAMPETAIGLFPDVGGSYFLPRLQG-KLGLYLGLTGYRLRGADVYYSGIATHYCESSKI 227
            ...:|:..:||..:||.|..||:..||||.| ...|.:.|||.:||.......|:.......|.:
E. coli   130 DDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSIL 194

  Fly   228 PDLETALLNCPDADDVPELLQKYHSPPEKPFSLQPVLEQI 267
              ||.|:          ||.:| ..|..:|.   ||.|:|
E. coli   195 --LEAAV----------ELAKK-ERPSSRPL---PVRERI 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HibchNP_732020.2 ECH_2 56..375 CDD:465024 63/219 (29%)
fadJNP_416843.1 fadJ 1..708 CDD:236864 66/235 (28%)

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