DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hibch and paaF

DIOPT Version :10

Sequence 1:NP_732020.2 Gene:Hibch / 41869 FlyBaseID:FBgn0038326 Length:386 Species:Drosophila melanogaster
Sequence 2:NP_415911.1 Gene:paaF / 946011 ECOCYCID:G6714 Length:255 Species:Escherichia coli


Alignment Length:263 Identity:65/263 - (24%)
Similarity:109/263 - (41%) Gaps:41/263 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 SSVLATESSNKGMIILNRPKALNAINLEMVRKIYKHLKKCEKSKSLVIIKGTGD-KAFCAGGDVR 108
            |.::.:......::.||||.|.||:|..::.::...|:......|:.:...||: :.|.||.|:.
E. coli     2 SELIVSRQQRVLLLTLNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNARFFAAGADLN 66

  Fly   109 ALVE---AGPTDESKSFFREEYSTNALIGNYKIPYIAIIDGITMGGGVGLSVHGKYRVASDRTLF 170
            .:.|   |...::::.      ...|.:..:..|.||.::|..:|.|..|::.....||.:...|
E. coli    67 EMAEKDLAATLNDTRP------QLWARLQAFNKPLIAAVNGYALGAGCELALLCDVVVAGENARF 125

  Fly   171 AMPETAIGLFPDVGGSYFLPRLQGK-LGLYLGLTGYRLRGADVYYSGIATHYCESSKIPDLETAL 234
            .:||..:|:.|..||:..|.|..|| |...:.|:|..:.......:|:.:....|..  .||.||
E. coli   126 GLPEITLGIMPGAGGTQRLIRSVGKSLASKMVLSGESITAQQAQQAGLVSDVFPSDL--TLEYAL 188

  Fly   235 LNCPDADDVPELLQKY--HSP-----------PEKPFSLQPVLEQINKNF-----SADSVEGILE 281
                      :|..|.  |||           ..:..:||..|.|..:.|     :.|..|||..
E. coli   189 ----------QLASKMARHSPLALQAAKQALRQSQEVALQAGLAQERQLFTLLAATEDRHEGISA 243

  Fly   282 NLQ 284
            .||
E. coli   244 FLQ 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HibchNP_732020.2 ECH_2 56..375 CDD:465024 64/252 (25%)
paaFNP_415911.1 PRK09674 1..255 CDD:182026 65/263 (25%)

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