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Protein Alignment CG5044 and Eci3

DIOPT Version :9

Sequence 1:	NP_732020.2	Gene:	CG5044 / 41869	FlyBaseID:	FBgn0038326	Length:	386	Species:	Drosophila melanogaster
Sequence 2:	NP_081223.1	Gene:	Eci3 / 69123	MGIID:	1916373	Length:	317	Species:	Mus musculus

Alignment Length:	319	Identity:	69/319 - (21%)
Similarity:	116/319 - (36%)	Gaps:	73/319 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly    42 QSSSSVLATESSNKGMIILNRPKALNAINLEMVRKIYKHLKKCEKSKSLV-IIKGTGDKAFCAGG 105
            :.|..:|.|.......|..|||...|||:.:|...|...||......|:: :..|||| .:.:|.
Mouse    59 RESKDILVTSEDGITKITFNRPTKKNAISFQMYLDIMHALKNASTDNSVITVFTGTGD-YYSSGN 122

  Fly   106 DVRALV-EAGPTDE----SKSFFREEYSTNALIGNYKIPYIAIIDGITMGGGVGLSVHGKYRVAS 165
            |::.|: :||...:    |....||  ..|..| ::..|.:|:::|..:|..|.:........||
Mouse   123 DLKNLINDAGEIQDVVATSTKILRE--FVNCFI-DFPKPLVAVVNGPAVGIAVTILALFDAVFAS 184

  Fly   166 DRTLFAMPETAIGLFPDVGGSYFLPRLQG--KLGLYLGLTGYRLRGADVYYSGIATHYCESSKIP 228
            ||..|..|.:.:...|:...:|..|::.|  |....| |.|.:|...:.:..|:.|...
Mouse   185 DRATFHTPFSQLSQIPEACSTYMFPKIMGPTKAAEML-LFGKKLTAREAWAQGLVTEVF------ 242

  Fly   229 DLETALLNCPDADDVPELLQKYHSPPEKPFSLQPVLEQINKNFSADSVEGILENLQNDGSEWAKK 293
                                     ||..|..:                           .|.:
Mouse   243 -------------------------PESTFETE---------------------------VWTR- 254

  Fly   294 TLETLSKMSPTSMKVTFRQLELGSQLSLAQCLIMEYRLAVRHLERSDFKEGVRALLIDK 352
             |:|.||:||..|:::...:....:..|......|...|:..:.|.::.:.:|..|..|
Mouse   255 -LKTYSKLSPNVMRISKELIRKHEKQKLYTVNAEECAAALERMPREEYAKALRNFLFRK 312

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.