DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5044 and hadhaa

DIOPT Version :9

Sequence 1:NP_732020.2 Gene:CG5044 / 41869 FlyBaseID:FBgn0038326 Length:386 Species:Drosophila melanogaster
Sequence 2:NP_001098746.1 Gene:hadhaa / 553401 ZFINID:ZDB-GENE-031222-5 Length:761 Species:Danio rerio


Alignment Length:295 Identity:72/295 - (24%)
Similarity:120/295 - (40%) Gaps:60/295 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 RTCSQLPMIGGATISQTKPTTMALSVRQSSSSVLATE------SSNKGMIILNRP--------KA 65
            |.|:      |...|.|.....:|||   ||:|||..      ..|..::.:|.|        |.
Zfish    10 RGCT------GVKSSFTGHGQRSLSV---SSAVLARTHVSYEVKDNVAVVRINDPTSKVNTLSKH 65

  Fly    66 LNAINLEMVRKIYKHLKKCEKSKSLVII-KGTGDKAFCAGGDVRALVEAGPTDESKSFFREEYST 129
            :.|..:|::.:::.:    ...||.|:| :..|  .|.||.|:..:......:|..|..:.....
Zfish    66 MQAEMVEVMNEVWGN----SSVKSAVLISRKPG--CFIAGADINMIQACTTAEEVTSLSQAGQKM 124

  Fly   130 NALIGNYKIPYIAIIDGITMGGGVGLSVHGKYRVA--SDRTLFAMPETAIGLFPDVGGSYFLPRL 192
            ...|....||.:|.|:|..:|||:..::..:||:|  |.:|:...||..:||.|..||:..||::
Zfish   125 FEQIEKSPIPIVAAINGSCLGGGLEFAIACQYRIATKSKKTVLGTPEVMLGLLPGAGGTQRLPKM 189

  Fly   193 QGKLGLY-LGLTGYRLRGADVYYSGIATHYCESSKIPDLETALLNCPDADDVPELLQKYHSPPEK 256
            .|....: :.|||..:|.......|: .|.......|.|:                    ||.|:
Zfish   190 VGLPAAFDMMLTGRNIRADKAKKMGL-VHQLVDPLGPGLK--------------------SPEER 233

  Fly   257 PFS-LQPVLEQINKNFSADSV-----EGILENLQN 285
            ... |:.|.....|..:|..|     :|:::.:|:
Zfish   234 TIEYLEEVAVDFAKGLAAKKVTLEKKKGLMQKVQD 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5044NP_732020.2 PRK05617 44..376 CDD:235533 64/266 (24%)
ECH_2 56..374 CDD:292731 58/248 (23%)
hadhaaNP_001098746.1 fa_ox_alpha_mit 25..760 CDD:131494 67/274 (24%)
crotonase-like 39..249 CDD:119339 55/236 (23%)
3HCDH_N 361..539 CDD:280833
3HCDH 542..637 CDD:279114
3HCDH 674..>750 CDD:279114
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.