DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hibch and Echdc1

DIOPT Version :10

Sequence 1:NP_732020.2 Gene:Hibch / 41869 FlyBaseID:FBgn0038326 Length:386 Species:Drosophila melanogaster
Sequence 2:XP_006512860.1 Gene:Echdc1 / 52665 MGIID:1277169 Length:374 Species:Mus musculus


Alignment Length:343 Identity:82/343 - (23%)
Similarity:137/343 - (39%) Gaps:104/343 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GHRTCSQLPMIGGATISQTKPTTMALSVR----QSSSSV-------------------------L 48
            ||.:.||...:....:::.. .|.:||||    |:..|:                         |
Mouse    61 GHGSASQSQGLRAGEMAKCL-LTSSLSVRTKLLQTGVSLYNTSHGFHEEEVKKILEQFPGGSIDL 124

  Fly    49 ATESSNKGMIILNRPKALNAIN----LEMVRKIYKHLKKCEKSKSLVI--IKGTGDKAFCAGGDV 107
            ..:.:..|::.||.|..:||.:    |:::.::.: |:...:.|.|:|  .|.|    ||:|.|:
Mouse   125 LKKQNGIGILTLNNPNKMNAFSGVMMLQLLERVIE-LENWTEGKGLIIHGAKNT----FCSGSDL 184

  Fly   108 RALVEAGPTDES---KSFFREEYSTNALIGNYKIPYI--AIIDGITMGGGVGLSVHGKYRVASDR 167
            .| |:|..|.||   .|.|.:    |.|....::|.|  |::.|..||||..|:....:|:.::.
Mouse   185 NA-VKALSTPESGVALSMFMQ----NTLTRFMRLPLISVALVQGWAMGGGAELTTACDFRLMTEE 244

  Fly   168 TLFAMPETAIGLFPDVGGSYFLP----------------RLQGKLGLYLGLTGYRLRGADVYYSG 216
            ::.......:|:.|..||:..|.                :|..|..|.:|||...|:.:|     
Mouse   245 SVIRFVHKEMGIVPSWGGTSRLVEIIGSRQALKVLSGTLKLDSKEALNIGLTDEVLQPSD----- 304

  Fly   217 IATHYCESSKIPDLETALLNCPDADDVPELLQKYHS-PPEKPFSLQPVLEQINKNFSADSVEGIL 280
                          ||..|     :...|.|:|:.| ||:       |:..:.|:..:.....|.
Mouse   305 --------------ETTAL-----EQAQEWLEKFVSGPPQ-------VIRGLKKSVCSARELYIE 343

  Fly   281 ENLQNDGSEWAKKTLETL 298
            |.|||:     :..||||
Mouse   344 EALQNE-----RDVLETL 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HibchNP_732020.2 ECH_2 56..375 CDD:465024 70/271 (26%)
Echdc1XP_006512860.1 CaiD 124..367 CDD:440647 71/279 (25%)

Return to query results.
Submit another query.