DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hibch and Echdc2

DIOPT Version :10

Sequence 1:NP_732020.2 Gene:Hibch / 41869 FlyBaseID:FBgn0038326 Length:386 Species:Drosophila melanogaster
Sequence 2:NP_081004.2 Gene:Echdc2 / 52430 MGIID:1289238 Length:296 Species:Mus musculus


Alignment Length:196 Identity:58/196 - (29%)
Similarity:92/196 - (46%) Gaps:24/196 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 SVRQSSSSVLATESSNKGM--IILNRPKALNAINLEMVRKIYKHLKKCEKSKSLVI------IKG 95
            :.|.....|.|....|:|:  |::|||.|.||:....|.::.:.|.:..:.:.:.:      :||
Mouse    28 TTRTPEIQVQALTGPNQGITEILMNRPNARNALGNVFVSELLEALAQLREDQQVRVLLFRSAVKG 92

  Fly    96 TGDKAFCAGGDVR-----ALVEAGPTDESKSFFREEYSTNALIGNYKIPYIAIIDGITMGGGVGL 155
                .||||.|::     :.||.|      :|.:......:.|..:.:|.||.:||..:|||:.|
Mouse    93 ----VFCAGADLKEREQMSDVEVG------TFVQRLRGLMSEIAAFPVPTIAAMDGFALGGGLEL 147

  Fly   156 SVHGKYRVASDRTLFAMPETAIGLFPDVGGSYFLPRLQG-KLGLYLGLTGYRLRGADVYYSGIAT 219
            ::....|:|:...:..:.||..||.|..||:..|||..| .|...|..||.||.||.....|:..
Mouse   148 ALACDLRIAASSAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLNGAQARELGLVN 212

  Fly   220 H 220
            |
Mouse   213 H 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HibchNP_732020.2 ECH_2 56..375 CDD:465024 54/179 (30%)
Echdc2NP_081004.2 crotonase-like 42..296 CDD:474030 55/182 (30%)

Return to query results.
Submit another query.