DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hibch and Srlp

DIOPT Version :10

Sequence 1:NP_732020.2 Gene:Hibch / 41869 FlyBaseID:FBgn0038326 Length:386 Species:Drosophila melanogaster
Sequence 2:NP_650199.1 Gene:Srlp / 41533 FlyBaseID:FBgn0038049 Length:378 Species:Drosophila melanogaster


Alignment Length:368 Identity:77/368 - (20%)
Similarity:135/368 - (36%) Gaps:57/368 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 TISQTK-----PTTMALSVRQSSSSVLATESSNKGMIILNRPKALNAINLEMVRKIYKHLK--KC 84
            |.|.||     |.|..... ....::|..:..|..:|.:|||:..|||:.....::.....  :.
  Fly    25 TFSSTKALHKDPATQEAEA-APPKNILVEKDKNITLIGINRPQQRNAIDSLTASQLCDAFANFEA 88

  Fly    85 EKSKSLVIIKGTGDKAFCAGGDVRALVEAGPTDESKS-----FFREEYSTNALIGNYKIPYIAII 144
            :.:..:.::.|.|. :||:|.|:..:    .|||.:.     ..|.|.|........|.|.:..|
  Fly    89 DDTSPVAVLYGVGG-SFCSGFDILEI----STDEKEEISVDILMRPEGSVGPTRRQIKKPVVCGI 148

  Fly   145 DGITMGGGVGLSVHGKYRVASDRTLFAMPETAIGLFPDVGGSYFLPRLQG-KLGLYLGLTGYRLR 208
            :|..:..|:.|::....||..:..:........|:.....|:..||.:.| ...|.|.|||..:.
  Fly   149 NGYCIANGLELALMCDLRVMEESAVLGFFNRRFGVPMLDAGTIRLPAMIGLSRALDLILTGRPVG 213

  Fly   209 GADVYYSGIATHYCESSKIP---------DLETALLNCPDADDVPELLQKYHSPPEKPFSLQPVL 264
            ..:.:..|:....     :|         :|.|.|...|....:.:....|.|..|.....|.|.
  Fly   214 SQEAHDIGLVNRI-----VPTGTALGNALELATCLAKFPQRALIHDRNSVYSSTFETSTFHQAVQ 273

  Fly   265 EQINKNFSADSVEGILENLQNDGSEWAKKTLE---TLSKMSPTSMKVTFRQLELGSQLSLAQCLI 326
            .::  .|::   ..|:|::|| |.:|..:|.:   |.|.:........:...|:....:..:.|.
  Fly   274 NEV--MFTS---REIIEDMQN-GIKWFNQTFKPDTTHSWLKRDRSMADWDDEEVAEAAAQKEKLK 332

  Fly   327 MEYRLAVRHLERSDFKEGVRALLIDKDQKPQWQPTKLADVTEE 369
            .|...|:...|:               ||...:..|.:..|||
  Fly   333 QEQEAALAEAEK---------------QKQAEKAQKRSKKTEE 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HibchNP_732020.2 ECH_2 56..375 CDD:465024 69/334 (21%)
SrlpNP_650199.1 crotonase-like 49..259 CDD:474030 45/219 (21%)

Return to query results.
Submit another query.