DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hibch and Cdyl

DIOPT Version :10

Sequence 1:NP_732020.2 Gene:Hibch / 41869 FlyBaseID:FBgn0038326 Length:386 Species:Drosophila melanogaster
Sequence 2:XP_017456089.1 Gene:Cdyl / 361237 RGDID:1549745 Length:617 Species:Rattus norvegicus


Alignment Length:317 Identity:64/317 - (20%)
Similarity:109/317 - (34%) Gaps:108/317 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 MALSVRQSSSS-----------------VLATESSNKGMIILNRPKALNAINLEMVRKIYKHLKK 83
            :..||||:.|:                 :|:|:||..           |::|.|:::::...|..
  Rat   347 LRFSVRQTESAYRYRDIVVRKQDGFTHILLSTKSSEN-----------NSLNPEVMKEVQSALST 400

  Fly    84 CEKSKSLVIIKGTGDKAFCAGGD----VRALVEAGPTDESKSFFREEYSTNALIGN-------YK 137
            .....|.:::.......||.|.|    :|.|     ||:.|   ||.......|.|       :|
  Rat   401 AAADDSKLVLLSAVGSVFCCGLDFIYFIRRL-----TDDRK---RESTKMAEAIRNFVNTFIQFK 457

  Fly   138 IPYIAIIDGITMGGGVGLSVHGKYRVASDRTLFAMPETAIGLFPDVGGSYFLPRLQGKLGL-YLG 201
            .|.|..::|..:|.|..:........|:::..|..|.|..|..||...:...|::.|.... .:.
  Rat   458 KPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEML 522

  Fly   202 LTGYRLRG---------ADVYYSGIATH---------------YCESSKIPDLETALLNCPDADD 242
            |:|.:|..         :.|::.|..|.               ..|.||      ||:.|     
  Rat   523 LSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPIVLEESK------ALVRC----- 576

  Fly   243 VPELLQKYHSPPEKPFSLQPVLEQINKN---------FSADSVEGILENLQNDGSEW 290
                            :::..|||.|:.         .||..::.:|:.||....|:
  Rat   577 ----------------NMKMELEQANERECDALKKIWGSAQGMDSMLKYLQRKIDEF 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HibchNP_732020.2 ECH_2 56..375 CDD:465024 55/280 (20%)
CdylXP_017456089.1 CD_CDY 56..105 CDD:349284
crotonase-like 363..559 CDD:119339 43/214 (20%)
Blue background indicates that the domain is not in the aligned region.

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