DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg4b and AT2G44140

DIOPT Version :9

Sequence 1:NP_650452.1 Gene:Atg4b / 41868 FlyBaseID:FBgn0038325 Length:668 Species:Drosophila melanogaster
Sequence 2:NP_001324765.1 Gene:AT2G44140 / 819020 AraportID:AT2G44140 Length:467 Species:Arabidopsis thaliana


Alignment Length:587 Identity:162/587 - (27%)
Similarity:225/587 - (38%) Gaps:185/587 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 SP-VSTSGAN---------LNLKTENAATATPQRKISTSSRFMNAFSQLYGGGNSGPSCGHVEQH 129
            || ||.||.:         .|:.|.:::.:.|.|:.|||                    ||    
plant    25 SPLVSDSGPSDNKSKFTLWSNVFTSSSSVSQPYRESSTS--------------------GH---- 65

  Fly   130 NEEPGDLSANRTPTKGMESKLVAMWHNVKYGWSGKMRQTSF---------------------SKE 173
                               |.|....|   ||:..:::.|.                     |..
plant    66 -------------------KQVCTTRN---GWTAFVKRVSMASGAIRRFQERVLGPNRTGLPSTT 108

  Fly   174 QPVWLLGRCYHRRFTPPVSMESSITELPSGADTTPDNATSAFDSIQATSTSTSLYPALNPQQIDE 238
            ..|||||.||                           ..||.::...|.|.|.|           
plant   109 SDVWLLGVCY---------------------------KISADENSGETDTGTVL----------- 135

  Fly   239 IVVPQELGMDAVENQVGEQPWEEGIEGFRRDFYSRIWMTYRREFPIMNGSNYTSDCGWGCMLRSG 303
                                     ...:.||.|:|.||||:.|.....:.||||..||||:||.
plant   136 -------------------------AALQLDFSSKILMTYRKGFEPFRDTTYTSDVNWGCMIRSS 175

  Fly   304 QMLFAQGLICHFLGRSWRYDSESQLHSTYEDNMHKKIVKWFGDSSSKSSPFSIHALVRLGEHLGK 368
            ||||||.|:.|.|||:|...||      ..:..:.:.::.|||  |:.|.||||.|:..|...|.
plant   176 QMLFAQALLFHRLGRAWTKKSE------LPEQEYLETLEPFGD--SEPSAFSIHNLIIAGASYGL 232

  Fly   369 KPGDWYGPASVSYLLKHALEHAA---QENADFDNISVYVAKDCTIYLQDIEDQCSIPEPAPKPHV 430
            ..|.|.||    |.:..|.|..|   ::..|..|.::.:|.......:|       .|....|.:
plant   233 AAGSWVGP----YAICRAWESLACKKRKQTDSKNQTLPMAVHIVSGSED-------GERGGAPIL 286

  Fly   431 PWQQAKRPQAETTKTEQQQHWKSLIVLIPLRLGSDKLNPVYAHCLKLLLSTEHCLGILGGKPKHS 495
            ..:.|.:...|.:|  .|..|..:|:|:||.||.|.:||.|...|....:....:|||||||..|
plant   287 CIEDATKSCLEFSK--GQSEWTPIILLVPLVLGLDSVNPRYIPSLVATFTFPQSVGILGGKPGAS 349

  Fly   496 LYFVGFQEDRLIHLDPHYCQEMVDVNQE--NFSLHSFHCKSPRKLKASKMDPSCCIGFYCATKSD 558
            .|.||.|||:..:||||..|::|.||:|  :....|:||...|.:....:|||..:||||..|.|
plant   350 TYIVGVQEDKGFYLDPHEVQQVVTVNKETPDVDTSSYHCNVLRYVPLESLDPSLALGFYCRDKDD 414

  Fly   559 FDNFMESVQLYLHPMRCASGATVDKAAGSHHTTPQSSHQTEQTEMNYPLFSFSRGRCMDHERDEM 623
            ||:|.      |..::.|     :::.|:...|...:| |...:.||       |...|...||.
plant   415 FDDFC------LRALKLA-----EESNGAPLFTVTQTH-TAINQSNY-------GFADDDSEDER 460

  Fly   624 SD 625
            .|
plant   461 ED 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg4bNP_650452.1 Peptidase_C54 264..565 CDD:281417 114/305 (37%)
AT2G44140NP_001324765.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 191 1.000 Domainoid score I940
eggNOG 1 0.900 - - E1_KOG2674
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D431748at2759
OrthoFinder 1 1.000 - - FOG0000466
OrthoInspector 1 1.000 - - otm3516
orthoMCL 1 0.900 - - OOG6_100501
Panther 1 1.100 - - O PTHR22624
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X289
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.780

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