DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg4b and ATG4B

DIOPT Version :9

Sequence 1:NP_650452.1 Gene:Atg4b / 41868 FlyBaseID:FBgn0038325 Length:668 Species:Drosophila melanogaster
Sequence 2:XP_016859126.1 Gene:ATG4B / 23192 HGNCID:20790 Length:479 Species:Homo sapiens


Alignment Length:445 Identity:133/445 - (29%)
Similarity:206/445 - (46%) Gaps:81/445 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 MWHNVKYGWSGKMRQTSF----SKEQPVWLLGRCYHRRFTPPVSMESSITELPSGADTTPDNATS 213
            :|.....||.|.....::    .:..|::|:     .|:.|         .|..|.||.   ||.
Human     8 LWQPETSGWRGPCPGLAWVQARRRRYPIYLV-----HRWAP---------GLHYGTDTM---ATM 55

  Fly   214 AFDSIQATS--TSTSLYPALNPQQIDEIVVPQELGMDAVENQVGEQPWEEG--------IEGFRR 268
            ...|....|  .:|..|..|...:.::.            .:..|..|..|        .:....
Human    56 TVCSAPGGSGCVATLTYDTLRFAEFEDF------------PETSEPVWILGRKYSIFTEKDEILS 108

  Fly   269 DFYSRIWMTYRREFPIMNGSNYTSDCGWGCMLRSGQMLFAQGLICHFLGRSWRYDSESQLHSTYE 333
            |..||:|.|||:.||.:.|:..|||.|||||||.|||:|||.|:|..|||.||:....:...:|.
Human   109 DVASRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYF 173

  Fly   334 DNMHKKIVKWFGDSSSKSSPFSIHALVRLGEHLGKKPGDWYGPASVSYLLKHALEHAAQENADFD 398
            ..::..|       ..|.|.:|||.:.::|...||..|.||||.:|:.:||        :.|.||
Human   174 SVLNAFI-------DRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLK--------KLAVFD 223

  Fly   399 ---NISVYVAKDCTIYLQDIEDQCSIPEPAPKPHVPWQQAKRPQAETTK-----------TEQQQ 449
               :::|::|.|.|:.:::|...|       :..||...|....|::.:           |.:..
Human   224 TWSSLAVHIAMDNTVVMEEIRRLC-------RTSVPCAGATAFPADSDRHCNGFPAGAEVTNRPS 281

  Fly   450 HWKSLIVLIPLRLGSDKLNPVYAHCLKLLLSTEHCLGILGGKPKHSLYFVGFQEDRLIHLDPHYC 514
            .|:.|::|||||||...:|..|...||........||::||||..:.||:|:..:.||:||||..
Human   282 PWRPLVLLIPLRLGLTDINEAYVETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTT 346

  Fly   515 QEMVDVNQENF-SLHSFHCKSPR-KLKASKMDPSCCIGFYCATKSDFDNFMESVQ 567
            |..|:.....| ...||||:.|. ::..:::|||..:||:|.|:.||:::.:.|:
Human   347 QPAVEPTDGCFIPDESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVK 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg4bNP_650452.1 Peptidase_C54 264..565 CDD:281417 110/316 (35%)
ATG4BXP_016859126.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2674
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D332531at33208
OrthoFinder 1 1.000 - - FOG0000466
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100501
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R109
SonicParanoid 1 1.000 - - X289
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
76.750

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