DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg4b and LOC101884161

DIOPT Version :9

Sequence 1:NP_650452.1 Gene:Atg4b / 41868 FlyBaseID:FBgn0038325 Length:668 Species:Drosophila melanogaster
Sequence 2:XP_017209984.1 Gene:LOC101884161 / 101884161 -ID:- Length:460 Species:Danio rerio


Alignment Length:582 Identity:203/582 - (34%)
Similarity:269/582 - (46%) Gaps:198/582 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 PG------DLSANRTPTKGMESKLVAMWHNVKY-GWSGKMRQTSFSKEQPVWLLGRCYHRRFTPP 190
            ||      |:..::..|| ::|||::.||||:| |||.|.: ...||..||.|||:.|       
Zfish    31 PGLLDFSADVQGSKEKTK-LKSKLMSAWHNVRYRGWSLKSK-PRLSKSSPVCLLGQSY------- 86

  Fly   191 VSMESSITELPSGADTTPDNATSAFDSIQATSTSTSLYPALNPQQIDEIVVPQELGMDAVENQVG 255
                                        |.:||...                             
Zfish    87 ----------------------------QLSSTGVR----------------------------- 94

  Fly   256 EQPWEEGIEGFRRDFYSRIWMTYRREFPIMNGSNYTSDCGWGCMLRSGQMLFAQGLICHFLGRSW 320
                    |.|||.|.|.:||:|||.|..::||..:||.||||||||.|||.||||:.|.:...|
Zfish    95 --------ESFRRVFSSLLWMSYRRGFRPLDGSTLSSDAGWGCMLRSAQMLLAQGLLLHIMPNGW 151

  Fly   321 RY--------------DSESQL-HS---------------TYEDNMHKKIVKWFGDSSSKSSPFS 355
            .:              |:...| ||               ::|:..|::||.||||  ..|:||.
Zfish   152 TWPATHNQTKDDLEVLDAHGSLRHSGKSRRCSLGSALDGESHEERSHRRIVSWFGD--LPSAPFG 214

  Fly   356 IHALVRLGEHLGKKPGDWYGPASVSYLLKHALEHAAQENADFDNISVYVAKDCTIYLQDIEDQCS 420
            :|.||.||...||:.|||||||..:::|:.|:  :|.|.:|   :.||||:|||:|..|:.:.| 
Zfish   215 LHRLVELGRAFGKRAGDWYGPAIAAHILQKAV--SASELSD---LVVYVAQDCTVYTGDVLNLC- 273

  Fly   421 IPEPAPKPHVPWQQAKRPQAETTKTEQQQHWKSLIVLIPLRLGSDKLNPVYAHCLKLLLSTEHCL 485
                         :..|..|....|   ..||||::|:|:|||||.|||||..|:|.||....||
Zfish   274 -------------RTSRTDASWRST---SGWKSLVLLVPVRLGSDGLNPVYTGCVKRLLELRCCL 322

  Fly   486 GILGGKPKHSLYFVGFQEDRLIHLDPHYCQEMVDVNQENFSLHSFHCKSPRKLKASKMDPSCCIG 550
            ||:||||||||||||||.|:||:|||||||..|||.|::|.|.|||||:.||:..|:|||||.:|
Zfish   323 GIIGGKPKHSLYFVGFQNDQLIYLDPHYCQSAVDVQQDHFPLESFHCKTVRKMAFSRMDPSCTVG 387

  Fly   551 FYCATKSDFDNFMESVQLYLHPMRCASGATVDKAAGSHHTTPQSSHQTEQTEMNYPLFSFSRGRC 615
            ||..:::||.:.            |:.   |.||..|             :|..||:|:|..|..
Zfish   388 FYARSRADFHSL------------CSD---VSKALSS-------------SEQKYPIFTFVEGHS 424

  Fly   616 ---------MDHERDEMSDSLYKPLIKQVASLAQELGAQLAPPQHGDEHDQDDSESEEFVLL 668
                     ||....:..|.|                          ..:|..|.:||||||
Zfish   425 EGQSGSTSDMDITHTKTKDKL--------------------------RRNQKRSSTEEFVLL 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg4bNP_650452.1 Peptidase_C54 264..565 CDD:281417 152/330 (46%)
LOC101884161XP_017209984.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D332531at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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