DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc4 and spag1b

DIOPT Version :10

Sequence 1:NP_650451.1 Gene:Tmtc4 / 41867 FlyBaseID:FBgn0038324 Length:705 Species:Drosophila melanogaster
Sequence 2:NP_001428503.1 Gene:spag1b / 768178 ZFINID:ZDB-GENE-061013-512 Length:607 Species:Danio rerio


Alignment Length:169 Identity:43/169 - (25%)
Similarity:71/169 - (42%) Gaps:19/169 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   468 HRAIELYPNYESALMNLGNLYREHGQLSTAEEYIRLALQAYPAFPAAWMNL----GIVQSAQGKY 528
            |....:.|...:.:|:     .||.:  |||::    .|......|:.:.|    |.|....|.|
Zfish   429 HTPTNVTPPGHTHMMD-----EEHKE--TAEQH----TQDNSEHTASELELLRHDGKVLFCSGCY 482

  Fly   529 DKALASYEKALKYRANFAVCYYNMGNLYLEQKRYAEALHHWQHAVALNPRQPKAWANILTMLDNK 593
            ::|...|.::|:...:....|.|....|::.:|:.||......|:.:.|...||:..  ..|.||
Zfish   483 EEAAEKYTQSLQLDTHTCAAYTNRALCYIKLERFTEAQQDCDSALQIEPTNKKAFYR--RALANK 545

  Fly   594 GLQDDALRISNQALQHLPNDVSILFIRANVLGKLKHYTE 632
            ||: |.|...:...|.|..|.|:...: .:|.:|.|..|
Zfish   546 GLK-DYLSCRSDLQQVLRLDASVTEAQ-RLLMELTHLME 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc4NP_650451.1 TMTC_DUF1736 258..331 CDD:462468
LapB 431..675 CDD:442196 43/169 (25%)
TPR repeat 444..472 CDD:276809 1/3 (33%)
TPR repeat 480..506 CDD:276809 6/25 (24%)
TPR repeat 511..541 CDD:276809 9/33 (27%)
TPR repeat 546..574 CDD:276809 7/27 (26%)
TPR repeat 580..608 CDD:276809 9/27 (33%)
TPR repeat 614..642 CDD:276809 5/19 (26%)
TPR repeat 647..677 CDD:276809
spag1bNP_001428503.1 None
Blue background indicates that the domain is not in the aligned region.

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