DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tmtc4 and Tmtc4

DIOPT Version :10

Sequence 1:NP_650451.1 Gene:Tmtc4 / 41867 FlyBaseID:FBgn0038324 Length:705 Species:Drosophila melanogaster
Sequence 2:NP_082927.1 Gene:Tmtc4 / 70551 MGIID:1921050 Length:741 Species:Mus musculus


Alignment Length:749 Identity:269/749 - (35%)
Similarity:403/749 - (53%) Gaps:73/749 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LDLVHKATLHSMVCQAILVLICLLCYGCGGLSGAKFVFDDTVAIVKNRDVNSLPTNWTAIFTHDF 66
            ||.:..:.|.....:.::..:.|||:...  ....|||||:.|||.|:|:.| .|....::.|||
Mouse     8 LDHIVPSVLPPFWAKLVVGFVSLLCFARS--YDGDFVFDDSEAIVNNKDLQS-DTPLGDLWHHDF 69

  Fly    67 WGASLLSSDSHKSFRPLTTLMFHCEYALL-GLSAAHMKFLNLLLHCVNTLLMWRLIRSLY----- 125
            ||:.|.|:.||||:||||.|.|...|.|. |........:|:|||...::||..:...|:     
Mouse    70 WGSKLSSNTSHKSYRPLTVLTFRINYYLSGGFHPVGFHVVNILLHGSISILMLDVFSVLFGGLQY 134

  Fly   126 ---------VPEVSTARWAILSAALFAAHPIHTEAVSGVVGRAELMFGMIHLLCLLLTVANTGRL 181
                     .|..|     :|:..|||.||:|||.|:||||||:|:..:..||..|.........
Mouse   135 TGKGQRVHLAPRAS-----LLATLLFAVHPVHTECVAGVVGRADLLCALFFLLSFLGYCQAFKET 194

  Fly   182 GPQTGG--------LIMLLTAVGMLFKESAVTIPMSCVLLDYFQNGYYHL--------------- 223
            |.:.|.        |.:.|.||.||.||..:|:.....:.|....|...:               
Mouse   195 GNKEGTHSSTFWVLLSIFLGAVAMLCKEQGITVLGLNAVFDILVIGKLDILAAVRKVLHKDKSQE 259

  Fly   224 ---RFKDQWSLLRTRISYLFYLLGTLGLLTARLWWQDFET--PTFKEVDNPVAHNEHVLTRGLSQ 283
               .||:...|.|..:    ..:|...:|..|  |:...|  |.|.|||||.:..:.:|.|.::.
Mouse   260 NAGMFKNGGLLFRIAL----LTIGGTSMLYIR--WKIMGTGPPAFTEVDNPASFADSMLVRAINY 318

  Fly   284 QYLLVMNIWLMLCPHWLCYDWALGCVKLVTNIWDLRLQGVIGFYSIVLVALMNFRRLPG------ 342
            .|...:|.||:|||.|||:||::||:.|:.::.|.|:..:...: :.|:.|: |:.|..      
Mouse   319 NYYYSLNAWLLLCPWWLCFDWSMGCIPLIKSVGDWRVIALAALW-LCLIGLI-FQALCSEDSCKR 381

  Fly   343 --MMLALGLMIVPFLPASGIIC-VGFVIAERTLYVPSIGFCLLSIYGFLYWYDSSTENTHWRTAL 404
              :.|.||.:::||||||.:.. ||||:|||.||:||.|:|:|..:||    .:.:.:|..:..:
Mouse   382 RILTLGLGFLVIPFLPASNLFFRVGFVVAERVLYLPSAGYCVLLTFGF----GALSRHTKKKKPV 442

  Fly   405 RILLMLLFSVMMVRTRQRATDWLNEEQLFKSALQVCPDNAKVHYNIARLATDMGNNTKAFQHYHR 469
            ..:::.:..:..:|...|:.:|.:|||||:|||.|||.||||||||.:...|.||.|.|.::|..
Mouse   443 AAIILGILLINALRCVIRSGEWRSEEQLFRSALSVCPLNAKVHYNIGKNLADQGNQTAAIKYYRE 507

  Fly   470 AIELYPNYESALMNLGNLYREHGQLSTAEEYIRLALQAYPAFPAAWMNLGIVQSAQGKYDKALAS 534
            |:.|.|.|..|:.||||:.:|..:|..|||.:.||:|..|.|.||||||||||::..::::|..|
Mouse   508 AVRLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQPDFAAAWMNLGIVQNSLKRFEEAEQS 572

  Fly   535 YEKALKYRANFAVCYYNMGNLYLEQKRYAEALHHWQHAVALNPRQPKAWANILTMLDNKGLQDDA 599
            |..|:|:|..:..||||:|.||.:..|:.:||:.|::|..|.|....||.|::.:|||.|....|
Mouse   573 YRTAIKHRRKYPDCYYNLGRLYADLNRHVDALNAWRNATVLKPEHSLAWNNMIILLDNTGNLAQA 637

  Fly   600 LRISNQALQHLPNDVSILFIRANVLGKLKHYTEAEAIYKRVIELEPHNTLYHTNLGVLYHRWDKT 664
            ..:..:|||.:|||.|::|..||||||.:.|.|:||::.:.|:..|:...||.||.||||||...
Mouse   638 EAVGREALQLIPNDHSLMFSLANVLGKSQKYKESEALFLKAIKANPNVASYHGNLAVLYHRWGHL 702

  Fly   665 QEAIEAYRTAISISAARATTARENLSKLLKRLER 698
            ..|.:.|..::.:... |...:||.|.|.::||:
Mouse   703 DSAKKHYEISLQLDPV-AVGTKENYSLLRRKLEQ 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc4NP_650451.1 TMTC_DUF1736 258..331 CDD:462468 27/74 (36%)
LapB 431..675 CDD:442196 112/243 (46%)
TPR repeat 444..472 CDD:276809 14/27 (52%)
TPR repeat 480..506 CDD:276809 12/25 (48%)
TPR repeat 511..541 CDD:276809 15/29 (52%)
TPR repeat 546..574 CDD:276809 12/27 (44%)
TPR repeat 580..608 CDD:276809 9/27 (33%)
TPR repeat 614..642 CDD:276809 12/27 (44%)
TPR repeat 647..677 CDD:276809 12/29 (41%)
Tmtc4NP_082927.1 TMTC_DUF1736 292..366 CDD:462468 29/81 (36%)
TPR 475..681 CDD:440225 89/205 (43%)
TPR 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 482..515 14/32 (44%)
TPR repeat 482..510 CDD:276809 11/27 (41%)
TPR repeat 515..545 CDD:276809 15/29 (52%)
TPR 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 516..549 16/32 (50%)
TPR 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 550..583 13/32 (41%)
TPR repeat 550..578 CDD:276809 11/27 (41%)
TPR 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 584..617 11/32 (34%)
TPR repeat 584..610 CDD:276809 8/25 (32%)
TPR 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 618..651 15/32 (47%)
TPR repeat 618..646 CDD:276809 14/27 (52%)
TPR 645..>738 CDD:440225 21/60 (35%)
TPR repeat 651..681 CDD:276809 13/29 (45%)
TPR 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 652..685 12/32 (38%)
TPR 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 686..719 7/19 (37%)
TPR repeat 686..714 CDD:276809 7/19 (37%)

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