DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5038 and ifit8

DIOPT Version :9

Sequence 1:NP_650451.1 Gene:CG5038 / 41867 FlyBaseID:FBgn0038324 Length:705 Species:Drosophila melanogaster
Sequence 2:NP_001032654.1 Gene:ifit8 / 641567 ZFINID:ZDB-GENE-051127-17 Length:429 Species:Danio rerio


Alignment Length:243 Identity:55/243 - (22%)
Similarity:100/243 - (41%) Gaps:47/243 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   458 GNNTKAFQHYHRAIELYPNYE-SALMNLGNLYREHGQLST---AEEYIRLALQAYPAFPA----- 513
            |.|.:|.::...|.|.:||.: :.::..|||...|..||.   ||.||....:...|||.     
Zfish    61 GFNDEALKNLLLAKEEHPNDDRTVIVTYGNLAWVHSFLSNATEAEAYIEKINEILRAFPTPELHR 125

  Fly   514 ------AWMNLGIVQSAQGKYDKALASYEKAL-------KYRANFAVCYYNMGNLYLEQ---KRY 562
                  ||   .:::.::..|.:|...:.:||       ::....|...:.:..|.:.|   .|:
Zfish   126 EVLSEKAW---SLLKFSKKSYIRAKEIFLEALQKEPDDKEWNTGLAFSLFRLEGLKIGQYHRVRF 187

  Fly   563 AE--ALHHWQHAVALNPRQP--------KAWANILTMLDNKGLQDDALRISNQALQHLPNDVSIL 617
            .|  |:...:.|:.|:|..|        |.:.||        ...:|.:...|||:..|:::|::
Zfish   188 EESPAVLQLKKALKLDPDNPMILVYLGLKCYKNI--------KNSEAWQYMTQALKMAPHNLSVV 244

  Fly   618 FIRANVLGKLKHYTEAEAIYKRVIELEPHNTLYHTNLGVLYHRWDKTQ 665
            ...|..:.|.:.|..|..:...:::..|.::..|..:...| ||...|
Zfish   245 LHVAKFMKKEQCYDRALDVLLEMLKKAPDSSRLHHEVANNY-RWKAMQ 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5038NP_650451.1 DUF1736 258..331 CDD:285594
TPR 442..701 CDD:223533 55/243 (23%)
TPR_1 444..477 CDD:278916 6/18 (33%)
TPR repeat 444..472 CDD:276809 4/13 (31%)
TPR_17 466..499 CDD:290167 11/36 (31%)
TPR repeat 480..506 CDD:276809 10/28 (36%)
TPR repeat 511..541 CDD:276809 8/47 (17%)
TPR_1 512..545 CDD:278916 7/50 (14%)
TPR_1 546..577 CDD:278916 8/35 (23%)
TPR repeat 546..574 CDD:276809 7/32 (22%)
TPR repeat 580..608 CDD:276809 7/35 (20%)
TPR repeat 614..642 CDD:276809 5/27 (19%)
TPR repeat 647..677 CDD:276809 5/19 (26%)
ifit8NP_001032654.1 TPR_12 50..117 CDD:290160 17/55 (31%)
TPR repeat 206..236 CDD:276809 8/37 (22%)
TPR repeat 241..269 CDD:276809 5/27 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.