DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5038 and IFIT1B

DIOPT Version :9

Sequence 1:NP_650451.1 Gene:CG5038 / 41867 FlyBaseID:FBgn0038324 Length:705 Species:Drosophila melanogaster
Sequence 2:NP_001010987.1 Gene:IFIT1B / 439996 HGNCID:23442 Length:474 Species:Homo sapiens


Alignment Length:343 Identity:60/343 - (17%)
Similarity:117/343 - (34%) Gaps:98/343 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   392 DSSTENTHWRTALRILLMLLFSVMMVRTRQRATDWLNEEQLFKSALQVCPDNAKVHYNIARLATD 456
            :.:.||..:.|...|.:..|........|.:|...    .:.|.|:::.||:..:...:|....|
Human   169 EGNPENPEFNTGYAITVYRLDKFNTASGRNKAFSL----HVLKRAVRLNPDDVYIRVLLALKLQD 229

  Fly   457 MGNNTKAFQHYHRAIELYPNYESALMNLGNLYREHGQLSTAEEYIRLALQAYPAFPAAWMNLGIV 521
            .|...:..::...|:....:...........||..|.:..|.|.:::||:..|........:|:.
Human   230 EGQEAEGEKYIEEALTSISSQAYVFQYAAKFYRRKGSVDKALELLKMALETTPTSAFLHHQMGLC 294

  Fly   522 QSAQ-------------GK----YDK----ALASYEKALKYRANFAVCYYNMGNLYLEQKRYAEA 565
            ..||             |:    .|:    |:..:||.:..:..|.:.|.::...|.|...:.:|
Human   295 YRAQMIQIKEATNWQPRGQDRETVDRLVQLAICKFEKTIMLKRTFEMAYVDLAETYAEIGHHRKA 359

  Fly   566 LHHWQHAVALNPRQPKAWANILTMLDNKGLQ----DDAL----------------RISNQALQHL 610
            ..|:|                      |||:    :|.|                :..::|:.| 
Human   360 EEHFQ----------------------KGLRMKIFEDQLKQEIHYHYGRFQEHHGKSQDKAITH- 401

  Fly   611 PNDVSILFIRANVLGKLKHYTE-----AEAIYKRVIELEPHNTLYHTN---------LGVLYHRW 661
                   :::...:.|:.|..|     .|.:.||.|         |.|         ||:::...
Human   402 -------YLKGLKIEKMSHSREKLLNALEKLAKRCI---------HQNVRVVESVSLLGLIHKLK 450

  Fly   662 DKTQEAIEAYRTAISISA 679
            .:..:|:..|..|:.::|
Human   451 GEVSDALLCYERALRLAA 468

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG5038NP_650451.1 DUF1736 258..331 CDD:285594
TPR 442..701 CDD:223533 50/293 (17%)
TPR_1 444..477 CDD:278916 4/32 (13%)
TPR repeat 444..472 CDD:276809 4/27 (15%)
TPR_17 466..499 CDD:290167 5/32 (16%)
TPR repeat 480..506 CDD:276809 6/25 (24%)
TPR repeat 511..541 CDD:276809 8/50 (16%)
TPR_1 512..545 CDD:278916 8/53 (15%)
TPR_1 546..577 CDD:278916 6/30 (20%)
TPR repeat 546..574 CDD:276809 6/27 (22%)
TPR repeat 580..608 CDD:276809 6/47 (13%)
TPR repeat 614..642 CDD:276809 6/32 (19%)
TPR repeat 647..677 CDD:276809 7/38 (18%)
IFIT1BNP_001010987.1 TPR_11 36..>298 CDD:330823 24/132 (18%)
TPR 1 52..85
TPR repeat 54..80 CDD:276809
TPR 2 95..128
TPR repeat 97..123 CDD:276809