DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5038 and Tmtc1

DIOPT Version :9

Sequence 1:NP_650451.1 Gene:CG5038 / 41867 FlyBaseID:FBgn0038324 Length:705 Species:Drosophila melanogaster
Sequence 2:NP_945318.2 Gene:Tmtc1 / 387314 MGIID:3039590 Length:942 Species:Mus musculus


Alignment Length:775 Identity:251/775 - (32%)
Similarity:374/775 - (48%) Gaps:138/775 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 AILVLICLLCYGCGGLSGAKFVFDDTVAIVKNRDVN-SLPTNWTAIFTHDFWGASLLSSDSHKSF 80
            |:|.....|||| ..|.| :||.||..|||.|.||. ..|..| |||.:||||..|..|.||||:
Mouse    30 ALLAGASCLCYG-RSLRG-EFVHDDVWAIVNNPDVRPGTPLRW-AIFANDFWGKGLADSTSHKSY 91

  Fly    81 RPLTTLMFHCEYALLGLSAAHMKFLNLLLHCVNTL-LMWRLIRSLYVPEVSTARWAILSAALFAA 144
            |||..|.|.....|.|::..:...:|::|||:.|| ||:...::::    .....|.::|.|||.
Mouse    92 RPLCVLSFRLNIFLTGMNPFYFHAVNVILHCLVTLVLMYTCDKTVF----KNRGLAFVTALLFAV 152

  Fly   145 HPIHTEAVSGVVGRAELMFGMIHLLCLL-----LTVANTGRLGPQTGGLIMLLTAV-----GMLF 199
            ||:|||||:|:||||:::..::.||..|     |.....|:..|.|.....||.::     .||.
Mouse   153 HPVHTEAVAGIVGRADVLACLLFLLAFLSYQRSLDQGCAGQCFPTTASPFFLLLSLFLGTCAMLV 217

  Fly   200 KESAVTIPMSCVLLDYF-----------------------------QNGYYHLRFKDQ------- 228
            ||:.:|:...|::.|.|                             |..:.|...:.|       
Mouse   218 KETGITVFGVCLVYDLFSPSHKQDKLSNGAVCQHSSGQPGSPQPSSQQAHPHRESRKQRFPHKDS 282

  Fly   229 ------------------------WSLLR-----TRISYLFYLLGTLG-----------LLTARL 253
                                    |||:|     |..::|..|...|.           :|..||
Mouse   283 WGGCHSPLPPEPKSSGFPMSPRAMWSLMRCLTGSTNRNFLLTLRPFLKRAILVISYVTVILYFRL 347

  Fly   254 WWQDFETPTFKEVDNPVAHNEHVLTRGLSQQYLLVMNIWLMLCPHWLCYDWALGCVKLVTNIWDL 318
            |......|.|.|.|||.:.:.::|||.|:..|||..|:||:|.|..|||||.:|.:.||..|||:
Mouse   348 WIMGGTMPLFSEQDNPASFSPYILTRFLTYSYLLAFNVWLLLAPITLCYDWQVGSIPLVETIWDV 412

  Fly   319 R------LQGVIGFYSIVLVALMNFRRLPGMMLALGL--MIVPFLPASGIIC-VGFVIAERTLYV 374
            |      |..|:...|:..||.  |:||....:..||  ::.||:|||.:.. ||||:|||.||:
Mouse   413 RNLATILLAVVMALLSLHCVAA--FKRLEHKEVLAGLLFLVFPFIPASNLFFRVGFVVAERVLYM 475

  Fly   375 PSIGFCLLSIYGF------LYWYDSSTENTHWRTALRILLMLLFSVMMVRTRQRATDWLNEEQLF 433
            ||:|:|:|.::|.      |....:::     ..|..:||:||||...|:..:   .||:.|.||
Mouse   476 PSMGYCILFVHGLSKLCAGLSRCGATS-----LMASTVLLLLLFSWKTVKQNE---IWLSRESLF 532

  Fly   434 KSALQVCPDNAKVHYNIARLATDMGNNTKAFQHYHRAIELYPNYESALMNLGNLYREHGQLSTAE 498
            :|.:|..|.|||||||.|....|.|.|.:|..||..|::|||.:.|||.|||.|.::   ::.|:
Mouse   533 RSGVQTLPHNAKVHYNYANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLTKD---MAEAK 594

  Fly   499 EYIRLALQAYPAFPAAWMNLGIVQSAQGKYDKALASYEKALKYRANFAVCYYNMGNLYLEQKRYA 563
            .|.:.|||.:|....|..|||.:..:|.|.::|:...::::||..:||..|.::.:|..||:|:.
Mouse   595 MYYQKALQLHPQHNRALFNLGNLLKSQEKTEEAIMLLKESIKYGPDFADAYSSLASLLAEQERFK 659

  Fly   564 EALHHWQHAVALNPRQPKAWANILTMLDNKGLQDDALRISNQALQHLPNDVSILFIRANVLGKLK 628
            ||...:|..:...|.......|....|.:.|..:.|:....||:|..|:....:.....:...|.
Mouse   660 EAEDIYQAGIKNCPDSSDLHNNYAVFLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNLGRLYRSLG 724

  Fly   629 HYTEAEAIYKRVIE-------LEPHNTLYHTNLGVLYHRWDKTQEAIEAYRTAISISAAR 681
            ..::||..|:|.::       |.|        ||.||:...:.:||:|.||.|:|:..::
Mouse   725 ENSKAEEWYRRALKVARTAEVLSP--------LGALYYNTGRHKEALEVYREAVSLQPSQ 776

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5038NP_650451.1 DUF1736 258..331 CDD:285594 33/78 (42%)
TPR 442..701 CDD:223533 77/247 (31%)
TPR_1 444..477 CDD:278916 17/32 (53%)
TPR repeat 444..472 CDD:276809 14/27 (52%)
TPR_17 466..499 CDD:290167 14/32 (44%)
TPR repeat 480..506 CDD:276809 9/25 (36%)
TPR repeat 511..541 CDD:276809 7/29 (24%)
TPR_1 512..545 CDD:278916 9/32 (28%)
TPR_1 546..577 CDD:278916 9/30 (30%)
TPR repeat 546..574 CDD:276809 9/27 (33%)
TPR repeat 580..608 CDD:276809 6/27 (22%)
TPR repeat 614..642 CDD:276809 5/27 (19%)
TPR repeat 647..677 CDD:276809 10/29 (34%)
Tmtc1NP_945318.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 245..285 3/39 (8%)
DUF1736 351..425 CDD:285594 32/73 (44%)
TPR_11 542..605 CDD:290150 30/65 (46%)
TPR 1 543..576 17/32 (53%)
TPR_2 543..576 CDD:285020 17/32 (53%)
TPR repeat 543..571 CDD:276809 14/27 (52%)
TPR repeat 576..603 CDD:276809 11/29 (38%)
TPR 2 577..607 13/32 (41%)
TPR 577..607 CDD:197478 13/32 (41%)
TPR_17 596..628 CDD:290167 11/31 (35%)
TPR 3 608..641 9/32 (28%)
TPR repeat 608..636 CDD:276809 7/27 (26%)
TPR 621..940 CDD:223533 42/164 (26%)
TPR 4 642..675 10/32 (31%)
TPR repeat 642..670 CDD:276809 9/27 (33%)
TPR repeat 675..705 CDD:276809 6/29 (21%)
TPR 5 676..709 8/32 (25%)
TPR 6 710..742 5/31 (16%)
TPR repeat 710..738 CDD:276809 5/27 (19%)
TPR_7 715..744 CDD:289919 5/28 (18%)
TPR 7 743..776 13/40 (33%)
TPR repeat 743..771 CDD:276809 12/35 (34%)
TPR_14 749..786 CDD:290164 11/28 (39%)
TPR repeat 776..806 CDD:276809 0/1 (0%)
TPR 8 811..844
TPR repeat 812..839 CDD:276809
TPR repeat 844..878 CDD:276809
TPR 9 849..882
TPR 10 883..916
TPR_1 883..915 CDD:278916
TPR repeat 883..911 CDD:276809
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 74 1.000 Domainoid score I9186
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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