DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5038 and Tmtc3

DIOPT Version :9

Sequence 1:NP_650451.1 Gene:CG5038 / 41867 FlyBaseID:FBgn0038324 Length:705 Species:Drosophila melanogaster
Sequence 2:NP_477246.2 Gene:Tmtc3 / 37401 FlyBaseID:FBgn0020312 Length:926 Species:Drosophila melanogaster


Alignment Length:881 Identity:250/881 - (28%)
Similarity:374/881 - (42%) Gaps:228/881 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VCQAILVLICLLCY----GCGGLSGAKFVFDDTVAIVKNRDVNSLPTNWTAIFTHDFWGASLLSS 74
            :|.|     |::||    .||      .||||..||..|:|:.. .|....:|.:||||..:...
  Fly    40 ICVA-----CIVCYYNSTQCG------LVFDDISAIRDNKDLRP-HTPLINVFLNDFWGTPMRKE 92

  Fly    75 DSHKSFRPLTTLMFHCEYALLGLSAAHMKFLNLLLHCVNTLLMWR-----LIR------------ 122
            .||||:||||.|.|...|.|..|.......:||||| ::..|:||     |:|            
  Fly    93 QSHKSYRPLTVLTFRFNYLLHALEPFGYHLVNLLLH-LSVCLLWRRVCRLLLRQCAASGSNAISA 156

  Fly   123 --SLYVPEVSTARWAILSAALFAAHPIHTEAVSGVVGRAELMFGMIHLLCLLLTVANTGRLG-PQ 184
              |..|.:::|.  |.:::.|||.||:|||||:||||||||:..:..|...|....:.|..| |:
  Fly   157 PSSSSVSQLNTC--AFVASLLFAVHPVHTEAVTGVVGRAELLSSICFLAAFLSYAKSVGDSGCPR 219

  Fly   185 TGGLIMLLTAVG------MLFKESAVTIPMSCVLLDYF--------QNGYYHLRFKDQ------- 228
            ....:.|....|      ||.||..:||...||:.:.|        ...::.||..|:       
  Fly   220 RTNWLTLFGCFGSCLLASMLCKEQGITIAGICVVYELFVVHQLRPLHLCHFVLRLFDERTEQQSP 284

  Fly   229 ----------W--SLLRTRISYLFYLLGTLGLLTARLWWQDFETPTFKEVDNPVA---HNEHVLT 278
                      |  |.|..|:|:|..:  ||.||..|::....:.|.|...|||.:   ..|..||
  Fly   285 KLANPSGIRRWSSSTLWKRLSFLVGI--TLTLLVGRVYVMGSQLPIFTRFDNPASAADTPERQLT 347

  Fly   279 RGLSQQYLLVMNIWLMLCPHWLCYDWALGCVKLVTNIWDLR-LQGVIGFYSI-VLVALMNFRR-- 339
            .|    ||:.:|.||:|||..||.||.:|.|.|:....|.| :..::.|.:: .:||...|.|  
  Fly   348 YG----YLIYLNCWLLLCPSLLCCDWTMGTVPLLQGFTDSRNITTLLTFLALGAMVAKTCFTRNL 408

  Fly   340 --LPGMMLALGLMIVPFLPASGIIC-VGFVIAERTLYVPSIGFCLLSIYGF--------LYWYDS 393
              ...:::.||.|::||||||.:.. ||||:|||.||:||:|:|||..|||        |.|...
  Fly   409 ALSRTLIMCLGWMVLPFLPASNLFFPVGFVVAERILYMPSMGYCLLVAYGFEQLQRRGSLSWQRF 473

  Fly   394 STENTHWRTALRILLMLLFSVMMVRTRQRATDWLNEEQLFKSALQVCPDNAKVHYNI-------- 450
            |      :.||.|||:    ...::|.||..||..|..||.|.:.|...|||::.|:        
  Fly   474 S------QAALAILLL----THALKTHQRNLDWRTEYSLFMSGVHVNQRNAKLYNNVGHALENEG 528

  Fly   451 ------------ARLATD-------MG---NNTKAF----QHYHRAIELY--------------P 475
                        .|:.||       :|   ||.|.:    |.|.:|..|:              |
  Fly   529 KFEEALLYFQQAVRIQTDDIGAHINVGRTFNNLKRYAEAEQAYVQAKALFPQAKPGVSYHARIAP 593

  Fly   476 NYESALMNLGNLY-REHGQLSTAEEYIRLALQAYPAFPAAWMNLGIVQSAQGKYDKALASYEKAL 539
            |:.:..:||.||. :...:|..|:...|.|:.....:..|::|.|.:.....:..:|...||:||
  Fly   594 NHLNVFINLANLIAKNQTRLEEADHLYRQAISMRSDYVQAYINRGDILMKLNRTAQAQEVYEQAL 658

  Fly   540 KYRANFAVCYYNMGNLYLEQKRYAEALHHWQHAVALNPRQPKAWANILTMLDNKGLQD------- 597
            .|....|..|||:|.::|||.:..:|..::..|:.|.|...:|..|...:|...|.::       
  Fly   659 LYDNENADIYYNLGVVFLEQGKSQQAQVYFNKAIELYPEHEQALLNSAILLQELGGEEARRVSRS 723

  Fly   598 ----------------------------------------------------------------D 598
                                                                            |
  Fly   724 RLYKVLENDDQNEKVYFNLGMLAMDESSFDEAEQFFKRAIHLKADFRSALFNLALLLADTKRPLD 788

  Fly   599 ALRISNQALQHLPNDVSILFIRANV-LGKLKHYTEAEAIYKRVIELEPHNTLYHTNLGVLYHRWD 662
            |:...||.::|.|:.|..|.:..:: :..:|...|||..|:.::..:||||....||.|::....
  Fly   789 AVPFLNQLIRHHPSHVKGLILLGDIYINHMKDLDEAEKCYRSILHYDPHNTQGLHNLCVVFVERK 853

  Fly   663 KTQEAIEAYRTAISISAARATTARENLSKLLKRLER 698
            :..:|....:.|..::.|.....| :|..:|.||::
  Fly   854 RLAKAAACLQYAQRLAPAEDYIGR-HLQIVLARLQK 888

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5038NP_650451.1 DUF1736 258..331 CDD:285594 27/77 (35%)
TPR 442..701 CDD:223533 78/378 (21%)
TPR_1 444..477 CDD:278916 15/80 (19%)
TPR repeat 444..472 CDD:276809 13/61 (21%)
TPR_17 466..499 CDD:290167 11/47 (23%)
TPR repeat 480..506 CDD:276809 8/26 (31%)
TPR repeat 511..541 CDD:276809 8/29 (28%)
TPR_1 512..545 CDD:278916 9/32 (28%)
TPR_1 546..577 CDD:278916 11/30 (37%)
TPR repeat 546..574 CDD:276809 10/27 (37%)
TPR repeat 580..608 CDD:276809 8/98 (8%)
TPR repeat 614..642 CDD:276809 7/28 (25%)
TPR repeat 647..677 CDD:276809 7/29 (24%)
Tmtc3NP_477246.2 DUF1736 323..396 CDD:369859 27/76 (36%)
PEP_TPR_lipo <513..871 CDD:274350 72/357 (20%)
TPR repeat 514..542 CDD:276809 3/27 (11%)
TPR repeat 547..591 CDD:276809 8/43 (19%)
TPR repeat 598..625 CDD:276809 8/26 (31%)
TPR repeat 630..660 CDD:276809 8/29 (28%)
TPR repeat 665..693 CDD:276809 10/27 (37%)
TPR repeat 737..764 CDD:276809 0/26 (0%)
TPR repeat 803..834 CDD:276809 7/30 (23%)
TPR repeat 839..867 CDD:276809 6/27 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467056
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1320023at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.750

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