DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5038 and bbs-4

DIOPT Version :9

Sequence 1:NP_650451.1 Gene:CG5038 / 41867 FlyBaseID:FBgn0038324 Length:705 Species:Drosophila melanogaster
Sequence 2:NP_001255013.1 Gene:bbs-4 / 3565681 WormBaseID:WBGene00043992 Length:462 Species:Caenorhabditis elegans


Alignment Length:325 Identity:75/325 - (23%)
Similarity:123/325 - (37%) Gaps:60/325 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   430 EQLFKSALQVCPDNAKVHYNIA------------------------------------------R 452
            |||.| |.:|..||.||.|.:|                                          |
 Worm   144 EQLTK-ASEVMKDNPKVWYWLARAIYHFPAEKVQGKTFNPVESARTILMKPDIAKDATLICFLGR 207

  Fly   453 LATDMGNNTKAFQHYHRAIELYPNYESALMNLGNLYREHGQLSTAEEYIRLA-LQAY-PAFPAAW 515
            |..::|:.:.|...|..:::|.|:....:..||.:|...||:.  |.:::|. ..|| ||...|.
 Worm   208 LCEELGDTSGAIAAYKSSLKLQPDNTEVMNLLGLIYLRTGQVQ--EGFVQLGNCLAYDPANSQAI 270

  Fly   516 MNLGIVQSAQGKYDKALASYEKALKYRANFAVCYYNMGNLYLEQKRYAEALHHWQHAVALNPRQP 580
            :.:|.:......:|.||..|..|..........:.|:|...|.:.:.|.:....:.|..:||...
 Worm   271 LTIGSIMQNHSDHDVALNKYRVAADVSDYNGCLWNNIGIGLLARNKPAASHSALKKAAFINPLNY 335

  Fly   581 KAWANILTMLDNKGLQDDALRISNQALQHLPNDVSILFIRANVLGKLKHYTEAEAIYKRVIELE- 644
            |...|:..:.|...|...||.......:..|.:...:...|.:|..:.....|...||:.|||: 
 Worm   336 KISYNLGVLHDIMNLHCSALHYIKLCTELYPQNAKAVGAMAVILSHMNDDKNARLAYKKSIELKK 400

  Fly   645 -PHNTLYHTNLGVLYHRW-DKT--QEAIEAYR----TAISISAARATTARENLSKLLKRLEREAQ 701
             |...|   |..:..:|. |.|  ..|::.|:    :.:..||....|| ..|..:||:.::.|:
 Worm   401 NPSTIL---NYAIFEYRMKDVTAASNALKLYKDLQASGVKCSANNKETA-NLLESVLKQPDQSAE 461

  Fly   702  701
             Worm   462  461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5038NP_650451.1 DUF1736 258..331 CDD:285594
TPR 442..701 CDD:223533 68/311 (22%)
TPR_1 444..477 CDD:278916 11/74 (15%)
TPR repeat 444..472 CDD:276809 9/69 (13%)
TPR_17 466..499 CDD:290167 8/32 (25%)
TPR repeat 480..506 CDD:276809 7/26 (27%)
TPR repeat 511..541 CDD:276809 7/29 (24%)
TPR_1 512..545 CDD:278916 7/32 (22%)
TPR_1 546..577 CDD:278916 5/30 (17%)
TPR repeat 546..574 CDD:276809 5/27 (19%)
TPR repeat 580..608 CDD:276809 6/27 (22%)
TPR repeat 614..642 CDD:276809 5/27 (19%)
TPR repeat 647..677 CDD:276809 7/36 (19%)
bbs-4NP_001255013.1 TPR repeat 54..83 CDD:276809
PEP_TPR_lipo <64..>448 CDD:274350 71/310 (23%)
TPR repeat 91..117 CDD:276809
TPR repeat 122..152 CDD:276809 5/8 (63%)
TPR repeat 199..227 CDD:276809 5/27 (19%)
TPR repeat 232..262 CDD:276809 7/31 (23%)
TPR repeat 267..295 CDD:276809 7/27 (26%)
TPR repeat 303..329 CDD:276809 5/25 (20%)
TPR repeat 334..364 CDD:276809 6/29 (21%)
TPR repeat 369..397 CDD:276809 5/27 (19%)
TPR repeat 402..426 CDD:276809 7/26 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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