DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5038 and Ifit2

DIOPT Version :9

Sequence 1:NP_650451.1 Gene:CG5038 / 41867 FlyBaseID:FBgn0038324 Length:705 Species:Drosophila melanogaster
Sequence 2:NP_001019924.1 Gene:Ifit2 / 294091 RGDID:1307804 Length:464 Species:Rattus norvegicus


Alignment Length:285 Identity:62/285 - (21%)
Similarity:97/285 - (34%) Gaps:99/285 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   394 STENTHWRTALRILLMLLFSVMMVRTRQRATDWLNEE------------------------QLFK 434
            |.:||:.:.   :|.|.|..|...|.::...:.|.::                        ||.|
  Rat   205 SPDNTYVKV---LLAMKLEEVHENRAKELVEEALKKDPSAIDTMLGAAKFYVKVHDTDRAIQLLK 266

  Fly   435 SALQVCPDNAKVHYNI-------------ARLATDMGNNTK-------AFQHYHRAIELYPNYES 479
            .||:..|:||.|||.:             ....|..||..|       |..|..:|.::....|:
  Rat   267 KALESMPNNAYVHYYLGCCYRSKVLHILNTEETTSNGNREKLEALIQPALNHLRKAEDIKEMIEN 331

  Fly   480 ALMNLGNLYREHGQLSTAEEYIRLALQAYPAFPAAWMNLGIVQSAQGKYDKALASYEKALKYRAN 544
            :..:|..||....|...|:.|.                       |.:::|.|....|.|     
  Rat   332 SCSHLAGLYVTTKQYEEADYYF-----------------------QKEFNKDLRPLPKQL----- 368

  Fly   545 FAVCYYNMGNL-YLEQKRYAEALHHWQHAVALNPRQPKAWANILTMLDNKGLQDDALRISNQALQ 608
               .:...||. :.|:|....|::|:...|.:| |:.|.          ||...|.||  ..||:
  Rat   369 ---LHLRYGNFQFYERKCEDRAIYHYMEGVKIN-RESKP----------KGKMRDKLR--KLALR 417

  Fly   609 HLPNDVS-------ILFIRANVLGK 626
            .|..|.|       :.|:|.:..|:
  Rat   418 RLSRDESDPEALRILAFLREHREGQ 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5038NP_650451.1 DUF1736 258..331 CDD:285594
TPR 442..701 CDD:223533 47/213 (22%)
TPR_1 444..477 CDD:278916 11/52 (21%)
TPR repeat 444..472 CDD:276809 11/47 (23%)
TPR_17 466..499 CDD:290167 8/32 (25%)
TPR repeat 480..506 CDD:276809 6/25 (24%)
TPR repeat 511..541 CDD:276809 5/29 (17%)
TPR_1 512..545 CDD:278916 5/32 (16%)
TPR_1 546..577 CDD:278916 7/31 (23%)
TPR repeat 546..574 CDD:276809 6/28 (21%)
TPR repeat 580..608 CDD:276809 7/27 (26%)
TPR repeat 614..642 CDD:276809 4/20 (20%)
TPR repeat 647..677 CDD:276809
Ifit2NP_001019924.1 TPR_12 51..126 CDD:290160
TPR repeat 96..122 CDD:276809
TPR repeat 127..167 CDD:276809
TPR repeat 242..270 CDD:276809 4/27 (15%)
TPR repeat 275..325 CDD:276809 12/49 (24%)
TPR repeat 330..355 CDD:276809 7/47 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.