DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5038 and Ttc13

DIOPT Version :9

Sequence 1:NP_650451.1 Gene:CG5038 / 41867 FlyBaseID:FBgn0038324 Length:705 Species:Drosophila melanogaster
Sequence 2:XP_006255864.1 Gene:Ttc13 / 292095 RGDID:1310186 Length:845 Species:Rattus norvegicus


Alignment Length:303 Identity:70/303 - (23%)
Similarity:118/303 - (38%) Gaps:77/303 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   391 YDSSTENTHWRTALR---ILLMLLFSVMMVRTRQRATDWLNEE-QLFKSALQVC--PDNAKVHYN 449
            ||.:..  |:.|.|:   .|:..::...:...::...|..|.| .||:.:..:.  ||..:|...
  Rat   144 YDEAIR--HFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVIALEPDRPEVFEQ 206

  Fly   450 IARLATDMGNNTKAFQHYHRAIELYPNYESALMNLGNLYREHGQL-------STAEEYIRLALQA 507
            .|.:.:.:|...:|.....:||:|.|:        ..|||..|.|       :||.|..:.:|:.
  Rat   207 RAEILSPLGRINEAVNDLTKAIQLQPS--------ARLYRHRGTLYFISEDYATAHEDFQQSLEL 263

  Fly   508 YPAFPAAWMNLGIVQSAQGKYDKALASYEKALKYRANFAVCYYNMGNLYLEQKRYAEALHHWQHA 572
            ....|.|.:..|:....:|...:|:.::::|||.:.:|...|.::|..|.|...:..|...:|.|
  Rat   264 NRNQPTAMLYKGLTFFHRGLLKEAIEAFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKA 328

  Fly   573 VALNPRQPKAWANILTMLDNKGLQDDALRISNQALQHLPNDVSILFIRANVL---GKLKHYTEAE 634
            :.||                                  .|.|..|.:|..:|   |.|:   ||.
  Rat   329 LLLN----------------------------------QNHVQTLQLRGMMLYHHGSLQ---EAL 356

  Fly   635 AIYKRVIELEPHNT-------LYHTNLGVLYHRWDKTQEAIEA 670
            ..:||.::|||:|.       |.|...|..|       |.|:|
  Rat   357 KNFKRCLQLEPYNEVCQYMKGLSHVATGQFY-------EGIKA 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5038NP_650451.1 DUF1736 258..331 CDD:285594
TPR 442..701 CDD:223533 58/246 (24%)
TPR_1 444..477 CDD:278916 8/32 (25%)
TPR repeat 444..472 CDD:276809 5/27 (19%)
TPR_17 466..499 CDD:290167 11/39 (28%)
TPR repeat 480..506 CDD:276809 8/32 (25%)
TPR repeat 511..541 CDD:276809 7/29 (24%)
TPR_1 512..545 CDD:278916 8/32 (25%)
TPR_1 546..577 CDD:278916 8/30 (27%)
TPR repeat 546..574 CDD:276809 7/27 (26%)
TPR repeat 580..608 CDD:276809 0/27 (0%)
TPR repeat 614..642 CDD:276809 10/30 (33%)
TPR repeat 647..677 CDD:276809 8/31 (26%)
Ttc13XP_006255864.1 TPR repeat 132..156 CDD:276809 4/13 (31%)
TPR_11 164..232 CDD:290150 14/67 (21%)
TPR repeat 164..195 CDD:276809 5/30 (17%)
TPR_11 200..264 CDD:290150 17/71 (24%)
TPR repeat 201..229 CDD:276809 5/27 (19%)
TPR_11 233..296 CDD:290150 15/70 (21%)
TPR_1 234..266 CDD:278916 9/31 (29%)
TPR repeat 234..262 CDD:276809 8/27 (30%)
TPR repeat 267..297 CDD:276809 7/29 (24%)
TPR_11 270..332 CDD:290150 15/61 (25%)
TPR_1 302..335 CDD:278916 9/66 (14%)
TPR repeat 302..329 CDD:276809 6/26 (23%)
TPR_11 303..367 CDD:290150 21/100 (21%)
TPR repeat 336..364 CDD:276809 10/30 (33%)
TPR_11 337..401 CDD:290150 20/66 (30%)
TPR repeat 370..397 CDD:276809 7/30 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343750
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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