DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5038 and Ttc13

DIOPT Version :9

Sequence 1:NP_650451.1 Gene:CG5038 / 41867 FlyBaseID:FBgn0038324 Length:705 Species:Drosophila melanogaster
Sequence 2:NP_001360868.1 Gene:Ttc13 / 234875 MGIID:2384573 Length:845 Species:Mus musculus


Alignment Length:303 Identity:70/303 - (23%)
Similarity:119/303 - (39%) Gaps:77/303 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   391 YDSSTENTHWRTALR---ILLMLLFSVMMVRTRQRATDWLNEE-QLFKSALQVC--PDNAKVHYN 449
            ||.:..  |:.|.|:   .|:..::...:...::...|..|.| .||:.:..:.  ||..:|...
Mouse   144 YDEAIR--HFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVIALEPDRPEVFEQ 206

  Fly   450 IARLATDMGNNTKAFQHYHRAIELYPNYESALMNLGNLYREHGQL-------STAEEYIRLALQA 507
            .|.:.:.:|...:|.....:||:|.|:        ..|||..|.|       :||.|..:.:|:.
Mouse   207 RAEILSPLGRINEAVNDLTKAIQLQPS--------ARLYRHRGTLYFISEDYATAHEDFQQSLEL 263

  Fly   508 YPAFPAAWMNLGIVQSAQGKYDKALASYEKALKYRANFAVCYYNMGNLYLEQKRYAEALHHWQHA 572
            ....|.|.:..|:....:|...:|:.::::|||.:.:|...|.::|..|.|...:..|...:|.|
Mouse   264 NRNQPTAMLYKGLTFFHRGLLKEAIEAFKEALKQKVDFIDAYKSLGQAYRELGNFDAATESFQKA 328

  Fly   573 VALNPRQPKAWANILTMLDNKGLQDDALRISNQALQHLPNDVSILFIRANVL---GKLKHYTEAE 634
            :.||                                  .|.|..|.:|..:|   |.|:   ||.
Mouse   329 LLLN----------------------------------QNHVQTLQLRGMMLYHHGSLQ---EAL 356

  Fly   635 AIYKRVIELEPHNT-------LYHTNLGVLYHRWDKTQEAIEA 670
            ..:||.::|||:|.       |.|..:|..|       |.|:|
Mouse   357 KNFKRCLQLEPYNEVCQYMKGLSHVAMGQFY-------EGIKA 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5038NP_650451.1 DUF1736 258..331 CDD:285594
TPR 442..701 CDD:223533 58/246 (24%)
TPR_1 444..477 CDD:278916 8/32 (25%)
TPR repeat 444..472 CDD:276809 5/27 (19%)
TPR_17 466..499 CDD:290167 11/39 (28%)
TPR repeat 480..506 CDD:276809 8/32 (25%)
TPR repeat 511..541 CDD:276809 7/29 (24%)
TPR_1 512..545 CDD:278916 8/32 (25%)
TPR_1 546..577 CDD:278916 8/30 (27%)
TPR repeat 546..574 CDD:276809 7/27 (26%)
TPR repeat 580..608 CDD:276809 0/27 (0%)
TPR repeat 614..642 CDD:276809 10/30 (33%)
TPR repeat 647..677 CDD:276809 8/31 (26%)
Ttc13NP_001360868.1 PEP_TPR_lipo 104..>403 CDD:274350 70/303 (23%)
TPR repeat 132..156 CDD:276809 4/13 (31%)
TPR repeat 164..195 CDD:276809 5/30 (17%)
TPR repeat 201..229 CDD:276809 5/27 (19%)
TPR repeat 234..262 CDD:276809 8/27 (30%)
TPR repeat 267..297 CDD:276809 7/29 (24%)
TPR repeat 302..329 CDD:276809 6/26 (23%)
TPR repeat 336..364 CDD:276809 10/30 (33%)
TPR repeat 370..397 CDD:276809 7/30 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839908
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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