DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc4 and TMTC2

DIOPT Version :10

Sequence 1:NP_650451.1 Gene:Tmtc4 / 41867 FlyBaseID:FBgn0038324 Length:705 Species:Drosophila melanogaster
Sequence 2:NP_689801.1 Gene:TMTC2 / 160335 HGNCID:25440 Length:836 Species:Homo sapiens


Alignment Length:829 Identity:230/829 - (27%)
Similarity:367/829 - (44%) Gaps:184/829 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 AKFVFDDTVAIVKNRDVNSLP-TNWTAIFTHDFWGASLLSSDSHKSFRPLTTLMFHCEYALLGLS 98
            |.|.:||:.||..|:|:  || |.||.||.:||||..|..|.||||:|||.||.|...:|:.||:
Human    21 ADFCYDDSRAIKTNQDL--LPETPWTHIFYNDFWGTLLTHSGSHKSYRPLCTLSFRLNHAIGGLN 83

  Fly    99 AAHMKFLNLLLHCVNTLLMWRLIRSLYVPEVSTARWAILSAALFAAHPIHTEAVSGVVGRAEL-- 161
            ......:|:|||...|.|.....:.|    :....|..::..:||:||||||||:|:||||::  
Human    84 PWSYHLVNVLLHAAVTGLFTSFSKIL----LGDGYWTFMAGLMFASHPIHTEAVAGIVGRADVGA 144

  Fly   162 -MFGMIHLLCLLLTVANTGRLGPQTGGLIM---LLTAVGMLFKESAVTIPMSCVLLDYFQNGYYH 222
             :|.::.|||.:...:..| ...:|.|..:   |.....||:||..||:.....:.|.|.  ::.
Human   145 SLFFLLSLLCYIKHCSTRG-YSARTWGWFLGSGLCAGCSMLWKEQGVTVLAVSAVYDVFV--FHR 206

  Fly   223 LRFKDQWSLLRTRISYLFYLLGTL------GLLTARLWWQDFETPTFKEVDNPVAHNEHVLTRGL 281
            |:.|.....:..|.:...:|..:|      .||.|||:|...:.|:|...|||.|.::.:|||.|
Human   207 LKIKQILPTIYKRKNLSLFLSISLLIFWGSSLLGARLYWMGNKPPSFSNSDNPAADSDSLLTRTL 271

  Fly   282 SQQYLLVMNIWLMLCPHWLCYDWALGCVKLVTNIWDLRLQGVIGFYS-IVLVALMNFR------- 338
            :..||...|:||:|||..|.:||::..|.|:..:.|.|....:.||: ::|:|....:       
Human   272 TFFYLPTKNLWLLLCPDTLSFDWSMDAVPLLKTVCDWRNLHTVAFYTGLLLLAYYGLKSPSVDRE 336

  Fly   339 -------------------------------------------------RLPG----MMLALGLM 350
                                                             :||.    ::|:|.|:
Human   337 CNGKTVTNGKQNANGHSCLSDVEYQNSETKSSFASKVENGIKNDVSQRTQLPSTENIVVLSLSLL 401

  Fly   351 IVPFLPASGI-ICVGFVIAERTLYVPSIGFCLLSIYGFLYWYDSSTENTHWRTALRILLMLLF-- 412
            |:||:||:.: ..||||||||.||:||:|||||...|        ....:.:...|.|..|:|  
Human   402 IIPFVPATNLFFYVGFVIAERVLYIPSMGFCLLITVG--------ARALYVKVQKRFLKSLIFYA 458

  Fly   413 -SVMMV----RTRQRATDWLNEEQLFKSALQVCPDNAKVHYNIARLATDMGNNTKAFQHYHRAIE 472
             :.::|    :|..|..||.|||.|::|.::|.|  ||...|:..:.......::|...|..|:.
Human   459 TATLIVFYGLKTAIRNGDWQNEEMLYRSGIKVNP--AKAWGNLGNVLKSQSKISEAESAYRNALY 521

  Fly   473 LYPNYESALMNLGNLYREHGQLSTAEEYIRLALQAYPAFPAAWMNLGIVQSAQGKYDKALASYEK 537
            ...|....|.|||.|.:|:.:.:.|..|.:||:.:.|...:|::|.||:...||:.::|..::.|
Human   522 YRSNMADMLYNLGLLLQENSRFAEALHYYKLAIGSRPTLASAYLNTGIILMNQGRTEEARRTFLK 586

  Fly   538 A-------LK----YRANFAVCYYNMGNLYLEQKRYAEALHHWQHAVALNPRQ--PKAWANIL-- 587
            .       ||    ::::...|.||:|.||.||..|.|||..::.|:...|||  |::..|::  
Human   587 CSEIPDENLKDPHAHKSSVTSCLYNLGKLYHEQGHYEEALSVYKEAIQKMPRQFAPQSLYNMMGE 651

  Fly   588 ---------------------------------TMLDNKGLQDDALRISNQALQHLP-------- 611
                                             .:|...|.:.:|.::..:|::..|        
Human   652 AYMRLSKLPEAEHWYMESLRSKTDHIPAHLTYGKLLALTGRKSEAEKLFLKAIELDPTKGNCYMH 716

  Fly   612 --------------------------NDVSILFIRANVLGKLKHYTEAEAIYKRVIELEPHNTLY 650
                                      .:..::|..|::|.:......||..|.....|.|:....
Human   717 YGQFLLEEARLIEAAEMAKKAAELDSTEFDVVFNAAHMLRQASLNEAAEKYYDLAARLRPNYPAA 781

  Fly   651 HTNLGVLYHRWDKTQEAIEAYRTAISISAARATTARENLSKLLKRLERE 699
            ..|||.:.|...:.|:|...|..|:.:......| :.||.||...:|::
Human   782 LMNLGAILHLNGRLQKAEANYLRALQLKPDDVIT-QSNLRKLWNIMEKQ 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc4NP_650451.1 TMTC_DUF1736 258..331 CDD:462468 27/73 (37%)
LapB 431..675 CDD:442196 70/325 (22%)
TPR repeat 444..472 CDD:276809 6/27 (22%)
TPR repeat 480..506 CDD:276809 10/25 (40%)
TPR repeat 511..541 CDD:276809 10/40 (25%)
TPR repeat 546..574 CDD:276809 13/27 (48%)
TPR repeat 580..608 CDD:276809 6/62 (10%)
TPR repeat 614..642 CDD:276809 6/27 (22%)
TPR repeat 647..677 CDD:276809 8/29 (28%)
TMTC2NP_689801.1 ArnT <78..>198 CDD:441412 40/124 (32%)
TMTC_DUF1736 247..318 CDD:462468 26/70 (37%)
TPR 488..727 CDD:440225 53/240 (22%)
TPR 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 493..526 6/32 (19%)
TPR repeat 493..521 CDD:276809 6/27 (22%)
TPR 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 527..560 11/32 (34%)
TPR repeat 527..555 CDD:276809 10/27 (37%)
TPR repeat 560..590 CDD:276809 8/29 (28%)
TPR 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 561..594 8/32 (25%)
TPR repeat 595..634 CDD:276809 15/38 (39%)
TPR 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 606..639 14/32 (44%)
TPR repeat 642..671 CDD:276809 2/28 (7%)
TPR 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 643..676 1/32 (3%)
TPR 646..>819 CDD:440225 23/173 (13%)
TPR 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 677..710 5/32 (16%)
TPR repeat 679..705 CDD:276809 4/25 (16%)
TPR repeat 710..774 CDD:276809 6/63 (10%)
TPR 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 711..744 0/32 (0%)
TPR 8. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 745..778 8/32 (25%)
TPR 9. /evidence=ECO:0000255|PROSITE-ProRule:PRU00339 779..812 8/32 (25%)
TPR repeat 779..807 CDD:276809 8/27 (30%)

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