DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmtc4 and Ifit1bl2

DIOPT Version :10

Sequence 1:NP_650451.1 Gene:Tmtc4 / 41867 FlyBaseID:FBgn0038324 Length:705 Species:Drosophila melanogaster
Sequence 2:NP_444447.1 Gene:Ifit1bl2 / 112419 MGIID:2148249 Length:466 Species:Mus musculus


Alignment Length:305 Identity:66/305 - (21%)
Similarity:111/305 - (36%) Gaps:109/305 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   417 VRTRQRATDWLNEEQLFKSALQVCPDNAKVHYNIARLATDMGNNTKAFQHYHRAIELYPNYESAL 481
            :::.:.|...:..|||.|.:                ||| .||  .|:.||||            
Mouse    80 LQSLKEAEALIQSEQLSKRS----------------LAT-WGN--CAWLHYHR------------ 113

  Fly   482 MNLGNLYREHGQLSTAEEYIRLALQAYPAFPA---------------AWMNLGIVQSAQGKYDKA 531
                      |.|:.|:.|:....:....|.:               .|   .:.:.....|.:|
Mouse   114 ----------GSLAEAQVYLDKVEKVCKEFSSPFRYRLECAEMDCEEGW---ALRKCGSQNYTRA 165

  Fly   532 LASYEKALK-------YRANFAVCYYNM----GNLYLEQKRYAEALHHWQHAVALNPRQPKAWAN 585
            :|.:|:|||       |.|.:|...|::    ||          :|...:.||::.|..|  :..
Mouse   166 MACFERALKVEPENPEYNAGYADVAYHLDYYDGN----------SLQPLKKAVSVKPEDP--YLK 218

  Fly   586 ILTMLDNKGLQDDALRISNQALQHLPNDVSILFIRANVLGKL-KHY------TEAEAIYKRVIEL 643
            :|..|.   |||  ||.:::|.:|:......:..:.|:.|.: |.|      .||....|:.:|.
Mouse   219 VLLALK---LQD--LRKTDEAEKHIKEATLTISSQNNIFGYVAKFYRRKGCVEEALGFLKKALET 278

  Fly   644 EPHNTLYHTNLGVLYHRWDKTQEAIEAYRTAISISAARATTAREN 688
            :|.:...|..:|:.:    |||           ....:..|:|||
Mouse   279 KPSSPYLHFQIGLCH----KTQ-----------FFQMKKATSREN 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tmtc4NP_650451.1 TMTC_DUF1736 258..331 CDD:462468
LapB 431..675 CDD:442196 60/276 (22%)
TPR repeat 444..472 CDD:276809 10/27 (37%)
TPR repeat 480..506 CDD:276809 4/25 (16%)
TPR repeat 511..541 CDD:276809 9/51 (18%)
TPR repeat 546..574 CDD:276809 6/31 (19%)
TPR repeat 580..608 CDD:276809 9/27 (33%)
TPR repeat 614..642 CDD:276809 7/34 (21%)
TPR repeat 647..677 CDD:276809 5/29 (17%)
Ifit1bl2NP_444447.1 TPR 63..>241 CDD:440225 48/221 (22%)
TPR repeat 63..94 CDD:276809 1/13 (8%)
TPR repeat 99..129 CDD:276809 14/70 (20%)
TPR repeat 144..174 CDD:276809 6/32 (19%)
LapB 159..419 CDD:442196 45/182 (25%)
TPR repeat 179..210 CDD:276809 9/40 (23%)
TPR repeat 215..241 CDD:276809 10/32 (31%)
TPR repeat 282..329 CDD:276809 9/42 (21%)
TPR repeat 334..362 CDD:276809
TPR repeat 372..401 CDD:276809
TPR repeat 429..457 CDD:276809
Blue background indicates that the domain is not in the aligned region.

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