DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5038 and ifit5

DIOPT Version :9

Sequence 1:NP_650451.1 Gene:CG5038 / 41867 FlyBaseID:FBgn0038324 Length:705 Species:Drosophila melanogaster
Sequence 2:NP_001135660.1 Gene:ifit5 / 100216220 XenbaseID:XB-GENE-5842099 Length:473 Species:Xenopus tropicalis


Alignment Length:375 Identity:76/375 - (20%)
Similarity:146/375 - (38%) Gaps:69/375 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   366 VIAERTLYVPSIGFCL-LSIYGFLYWYDSSTENTHWRTALRILLMLLFSVMMVRTRQRATDWL-- 427
            ::.|..:....|.:.| .|.|.:|::|.:.:|::.         :.:..:..:.|:.:..:.|  
 Frog    79 ILTESKVLETDIKYLLTFSNYAWLHYYLNDSESSQ---------LYIDKINAIYTQSKGLEDLVQ 134

  Fly   428 ---NEEQ-----------------LFKSALQVCPDNAKVHYNIA----RLATDMGNNTKA----- 463
               |.||                 .|:.|::..||:.:.:..:|    ||....|.|..|     
 Frog   135 SETNGEQGWALMKFCGQYYERAKGCFEEAVKGNPDDPEWNTGLATVVCRLEEFRGRNCPAFKSVS 199

  Fly   464 FQHYHRAIELYPNYESALMNLGNLYREHGQLSTAEEYIRLALQAYPAFPAAWMNLGIVQSAQGKY 528
            ||...||::|.|......:.|....:|..:...|.::|:.||:..|..|.....:.......||:
 Frog   200 FQLLERAVKLNPKDSVIKVLLALKLQELKRQEEAMKHIKDALELTPDLPYVLRYVAKFYRRAGKF 264

  Fly   529 DKALASYEKALKYRANFAVCYYNMGNLY----LEQKRYAEALHHWQHAVALNPRQPKAWANILTM 589
            ::.:...:||:....|....::.:|..|    :::||..:|.:..|....:.....||..:....
 Frog   265 EETIRVLKKAVSITPNSGFLHHQLGLCYRQMIIQRKRTGKANYRGQDTQEIKDLTEKAIFHFEMA 329

  Fly   590 LDNKGLQDDALRISNQALQHLPNDVSILFIRANVLGKLKHYTEAEAIYKRVIEL----EPHNTLY 650
            |:.|           :...|...|::.:::|:|      .|.:||..||:..||    |......
 Frog   330 LEMK-----------KTFLHAHFDLADMYVRSN------QYQKAEETYKKATELITTPEHEKQQA 377

  Fly   651 HTNLGVLYHRWDKTQ-EAIEAYRTAISISAARATTARENLSKLLKRLERE 699
            |...|.......|:: ||:|.|:..:.|  ....|.|:.....|:|:..:
 Frog   378 HLQYGKFLENSKKSEDEAVEQYKEGLRI--PDQNTHRQECEMCLRRIANQ 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5038NP_650451.1 DUF1736 258..331 CDD:285594
TPR 442..701 CDD:223533 60/276 (22%)
TPR_1 444..477 CDD:278916 12/41 (29%)
TPR repeat 444..472 CDD:276809 10/36 (28%)
TPR_17 466..499 CDD:290167 7/32 (22%)
TPR repeat 480..506 CDD:276809 5/25 (20%)
TPR repeat 511..541 CDD:276809 5/29 (17%)
TPR_1 512..545 CDD:278916 5/32 (16%)
TPR_1 546..577 CDD:278916 6/34 (18%)
TPR repeat 546..574 CDD:276809 6/31 (19%)
TPR repeat 580..608 CDD:276809 4/27 (15%)
TPR repeat 614..642 CDD:276809 7/27 (26%)
TPR repeat 647..677 CDD:276809 7/30 (23%)
ifit5NP_001135660.1 PEP_TPR_lipo <144..>405 CDD:274350 58/277 (21%)
TPR repeat 219..242 CDD:276809 5/22 (23%)
TPR repeat 248..276 CDD:276809 5/27 (19%)
TPR repeat 281..332 CDD:276809 9/50 (18%)
TPR repeat 337..365 CDD:276809 9/33 (27%)
TPR repeat 375..404 CDD:276809 7/28 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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