DRSC/TRiP Functional Genomics Resources

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Protein Alignment Surf4 and ERV29

DIOPT Version :9

Sequence 1:NP_477222.1 Gene:Surf4 / 41864 FlyBaseID:FBgn0019925 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_011800.3 Gene:ERV29 / 853201 SGDID:S000003516 Length:310 Species:Saccharomyces cerevisiae


Alignment Length:266 Identity:90/266 - (33%)
Similarity:159/266 - (59%) Gaps:9/266 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EYIAKTEDVAEQ-VIKRGKNVLPTVARLCLIATFFEDGLRMYIQWNEQREYMDMSWGCGKFLATV 69
            ::.::.|.:.:. |:.:.|..:|:::|..::|||:||..|:..||::|..|::.......|...|
Yeast    49 KFASRIEGLTDNAVVYKLKPYIPSLSRFFIVATFYEDSFRILSQWSDQIFYLNKWKHYPYFFVVV 113

  Fly    70 FVLVNLLGQLGGCGMVMARFKVDIAVGLLFFIVVLQTVAYSILWDFQFLLRNFALIGALLLVLAE 134
            |::|..:..|.|..:::.|.:.:.|.|:|...|:.|.:.|.:.....|:||||::||.||:..::
Yeast   114 FLVVVTVSMLIGASLLVLRKQTNYATGVLCACVISQALVYGLFTGSSFVLRNFSVIGGLLIAFSD 178

  Fly   135 ARIEGRSLFAGVPSMG--ENKPKNFMQLAGRILLAFMFITLIRFELSVWQVIQDIIGSILMVLVV 197
            :.::.::.|..:|.:.  .:|.|.::..|||||:..|||. ..|..|.:.|:..|||:|..   .
Yeast   179 SIVQNKTTFGMLPELNSKNDKAKGYLLFAGRILIVLMFIA-FTFSKSWFTVVLTIIGTICF---A 239

  Fly   198 LGYKTKLSALILVALLTILNLYHNAWWTIPSYKPLRDFLKYDFFQTLSVIGGLLMIVSLGPGGVS 262
            :|||||.::::|..:||..|:..|.:|...:.|  ||||||:|:|.||:|||||::.:.|.|.:|
Yeast   240 IGYKTKFASIMLGLILTFYNITLNNYWFYNNTK--RDFLKYEFYQNLSIIGGLLLVTNTGAGELS 302

  Fly   263 MDEHKK 268
            :||.||
Yeast   303 VDEKKK 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Surf4NP_477222.1 SURF4 5..270 CDD:111019 90/266 (34%)
ERV29NP_011800.3 DoxX 48..310 CDD:419711 90/266 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342211
Domainoid 1 1.000 163 1.000 Domainoid score I838
eggNOG 1 0.900 - - E1_COG2259
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6052
Inparanoid 1 1.050 163 1.000 Inparanoid score I1050
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51950
OrthoFinder 1 1.000 - - FOG0003735
OrthoInspector 1 1.000 - - oto99457
orthoMCL 1 0.900 - - OOG6_104535
Panther 1 1.100 - - LDO PTHR23427
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1415
SonicParanoid 1 1.000 - - X2591
TreeFam 1 0.960 - -
1514.790

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