DRSC/TRiP Functional Genomics Resources

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Protein Alignment Surf4 and surf4

DIOPT Version :10

Sequence 1:NP_477222.1 Gene:Surf4 / 41864 FlyBaseID:FBgn0019925 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_001008088.2 Gene:surf4 / 493450 XenbaseID:XB-GENE-5807555 Length:269 Species:Xenopus tropicalis


Alignment Length:267 Identity:159/267 - (59%)
Similarity:207/267 - (77%) Gaps:0/267 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PNEYIAKTEDVAEQVIKRGKNVLPTVARLCLIATFFEDGLRMYIQWNEQREYMDMSWGCGKFLAT 68
            |...:...|::|:|.::..|..||.:|.||||:||.||||||::||||||||::|||.||..|||
 Frog     3 PGNVMGAAEELADQFLRVTKRYLPHIAHLCLISTFLEDGLRMWLQWNEQREYINMSWNCGMHLAT 67

  Fly    69 VFVLVNLLGQLGGCGMVMARFKVDIAVGLLFFIVVLQTVAYSILWDFQFLLRNFALIGALLLVLA 133
            :||:.||.|||.||.:|:.|..|..|...|..|:|||||.|:||||.:||:||.||:|.|||:||
 Frog    68 LFVIFNLCGQLAGCVLVLTRKFVPYACFGLLGIIVLQTVVYNILWDAKFLMRNMALVGGLLLLLA 132

  Fly   134 EARIEGRSLFAGVPSMGENKPKNFMQLAGRILLAFMFITLIRFELSVWQVIQDIIGSILMVLVVL 198
            |:|.||:|:|||||:||...|:.:|||.||:||..||:||:.|..|.:.:.|||.|..|::||.:
 Frog   133 ESRSEGKSMFAGVPNMGGTSPRQYMQLGGRVLLILMFMTLLHFNASPFTIFQDIFGLALILLVAV 197

  Fly   199 GYKTKLSALILVALLTILNLYHNAWWTIPSYKPLRDFLKYDFFQTLSVIGGLLMIVSLGPGGVSM 263
            |:||||:||.||..|.::|:..||:||:|||:||.|||||||||||||:||||::|:||||||||
 Frog   198 GFKTKLAALTLVLWLLVINVVQNAFWTVPSYRPLHDFLKYDFFQTLSVMGGLLLVVALGPGGVSM 262

  Fly   264 DEHKKKW 270
            |||||||
 Frog   263 DEHKKKW 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Surf4NP_477222.1 SURF4 5..270 CDD:111019 156/264 (59%)
surf4NP_001008088.2 SURF4 6..269 CDD:111019 156/262 (60%)

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