DRSC/TRiP Functional Genomics Resources

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Protein Alignment Surf4 and CG17207

DIOPT Version :10

Sequence 1:NP_477222.1 Gene:Surf4 / 41864 FlyBaseID:FBgn0019925 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_996202.1 Gene:CG17207 / 2768665 FlyBaseID:FBgn0038051 Length:220 Species:Drosophila melanogaster


Alignment Length:244 Identity:49/244 - (20%)
Similarity:101/244 - (41%) Gaps:56/244 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 KNVLPTVARLCLIATFFEDGLRMYIQWNEQREYMDMSWGCGKFLATVFVLVNLLGQLGGCGMVMA 87
            |.:|.|:||:.::::|..|.:.:...|..::..::::.|||:..|.|.:.:..:||..|..:::.
  Fly    18 KMLLSTLARMLIVSSFLADAMHICQNWRLEQSILNINCGCGRIAAGVCINLMAIGQFVGSVLIVT 82

  Fly    88 RFKVDIAVGLL----FFIVVLQTVAYSILWDFQFLLRNFALIGALLLVLAEARIEGRSLFAGVPS 148
            ..::....|||    :..:.|.....::...||..    .:|.||::::..:|            
  Fly    83 GKRIYAGTGLLWLAGYLRIALNPTQRNLAKYFQVC----NVISALMVIMLRSR------------ 131

  Fly   149 MGENKPKNFMQLAGRILLAFMFITLIRF---ELSVWQVIQDIIGSILMVLVVLGYKTKLSALILV 210
                         ...::||:.:|.:.:   |..:|.|..: .|..|     ||::.|       
  Fly   132 -------------RTAVVAFLLLTFVNWKDMERHLWLVFYN-FGEQL-----LGHQKK------- 170

  Fly   211 ALLTILNLYHNAWWTI--PSYKPLRDFLKYDFFQTLSVIGGLLMIVSLG 257
            ..:.::.|.|.....:  ||...     :..|:..:||.||.:.||..|
  Fly   171 DPVGLMGLQHVGMQILDDPSLAS-----RESFWHKVSVAGGFIFIVVNG 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Surf4NP_477222.1 SURF4 5..270 CDD:111019 49/244 (20%)
CG17207NP_996202.1 None

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