DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Surf4 and SPCC970.06

DIOPT Version :9

Sequence 1:NP_477222.1 Gene:Surf4 / 41864 FlyBaseID:FBgn0019925 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_587849.1 Gene:SPCC970.06 / 2539516 PomBaseID:SPCC970.06 Length:302 Species:Schizosaccharomyces pombe


Alignment Length:251 Identity:95/251 - (37%)
Similarity:153/251 - (60%) Gaps:12/251 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LPTVARLCLIATFFEDGLRMYIQWNEQ----REYMDMSWGCGKFLATVFVLVNLLGQLGGCGMVM 86
            :|.:.|..::||:|||.:|:..||.||    |:|....:|....|..|.|::.|:|..    :|:
pombe    54 MPLLGRFLIVATYFEDAIRIVTQWPEQVSYMRDYRRFRFGTAPLLLFVCVVLMLVGST----LVV 114

  Fly    87 ARFKVDIAVGLLFFIVVLQTVAYSILWDFQFLLRNFALIGALLLVLAEARIEGR-SLFAGVPSMG 150
            .:.:...|:|.|.|:.:||..||.::...:...||.::||.|.||.::..|..| :.|||:|::.
pombe   115 FKKRQAYAIGSLLFVTLLQAFAYGLITSGEMFFRNMSVIGGLCLVASDTFIHRRINRFAGLPAVS 179

  Fly   151 ENKPKNFMQLAGRILLAFMFITLIRFE---LSVWQVIQDIIGSILMVLVVLGYKTKLSALILVAL 212
            |:..:.:.|||||:||.|||:.|:..|   :|..:::..|:......:||:|:|.|..|.:||.:
pombe   180 EHNKRTYFQLAGRVLLIFMFLGLLAKEGSGISWTRILVHILSVTACAMVVIGFKAKFFAAVLVLI 244

  Fly   213 LTILNLYHNAWWTIPSYKPLRDFLKYDFFQTLSVIGGLLMIVSLGPGGVSMDEHKK 268
            |::.|...|::|::|...|.|||.:||||||||::||||.:|:.|||..|:||.||
pombe   245 LSVANFIINSFWSVPRESPYRDFYRYDFFQTLSIVGGLLYLVNTGPGKFSVDEKKK 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Surf4NP_477222.1 SURF4 5..270 CDD:111019 95/251 (38%)
SPCC970.06NP_587849.1 SURF4 33..302 CDD:111019 95/251 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 180 1.000 Domainoid score I816
eggNOG 1 0.900 - - E1_COG2259
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6052
Inparanoid 1 1.050 180 1.000 Inparanoid score I1128
OMA 1 1.010 - - QHG51950
OrthoFinder 1 1.000 - - FOG0003735
OrthoInspector 1 1.000 - - oto101063
orthoMCL 1 0.900 - - OOG6_104535
Panther 1 1.100 - - LDO PTHR23427
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1415
SonicParanoid 1 1.000 - - X2591
TreeFam 1 0.960 - -
1413.860

Return to query results.
Submit another query.