DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerRS-m and AT5G27470

DIOPT Version :9

Sequence 1:NP_001262599.1 Gene:SerRS-m / 41862 FlyBaseID:FBgn0021750 Length:417 Species:Drosophila melanogaster
Sequence 2:NP_198099.1 Gene:AT5G27470 / 832806 AraportID:AT5G27470 Length:451 Species:Arabidopsis thaliana


Alignment Length:410 Identity:125/410 - (30%)
Similarity:203/410 - (49%) Gaps:24/410 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 RQRSHDAKAVEAPIHRPVPTSAQL---DELERNVVVRHHKNNVPLIRSLIQELDAGDQHKLRQLQ 79
            |||..:..:.....::.....|||   .|....::.:..||...   |..:|.:..:.:  ..|:
plant    43 RQRQFEVDSFRKEFNKLNKQVAQLKIKKEDASEIIQQTEKNKQD---STAKEAEVREAY--AALK 102

  Fly    80 AELEQLPNATHPRLRDYGEEPRELAQYV---HRQLTPQSRLKEFSELARALNLYRMDHLGNYTGH 141
            |:|||:.|..|..:....:|...|...:   .|..||..:||...:|...|.:..........|.
plant   103 AKLEQVGNLVHDSVPVDKDEANNLVIKLWGEKRFSTPGLKLKNHVDLVELLGIADTKRGAEIAGA 167

  Fly   142 KSYYLTGQLATLEQAIIQYALQAVTEHGFKLISVPDILPKEVIESCGMRTEGERTQVYKLDTGE- 205
            :.::|.|....|.||:|.:.|..:.:.||..:..|..:.|:|:..|....:.:. ::||: ||| 
plant   168 RGFFLKGDGLMLNQALINFGLTFLKKRGFTGLQPPFFMRKDVMAKCAQLAQFDE-ELYKV-TGEG 230

  Fly   206 ---CLSGTSEMALAGFFANKLLSEDQLPLKVTAVSRCYRAET-SGLQEEKGIYRVHQFNKVEMFA 266
               .|..|:|..|..:..::.:...:|||:....|.|:|.|. |..::..||:|||||.|:|.|.
plant   231 DDKYLIATAEQPLCAYHIDEWIHPTELPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKIEQFC 295

  Fly   267 IC--TEEQSEAELEEFKNIEVDLFRRLGLNFRLLDMPPCELGAPAYQKYDIEAWMPGRQMWGEIS 329
            |.  .|..|...|:|......|.::.|.|.::::.:....|...|.:|||:|||.|..:.:.|:.
plant   296 ITGPNENASWEMLDEMMKNSEDFYQALKLPYQIVSIVSGALNDAAAKKYDLEAWFPSSETFRELV 360

  Fly   330 SCSNCTDYQARRLGIRY--RRSADGQILHAHTINGTATAIPRLLIALLESYQKEDGIEIPAVLRP 392
            |||||||||||||.|||  ::|.:....:.|.:|.|.||..|.:..:||:||:|||::||.||:|
plant   361 SCSNCTDYQARRLEIRYGQKKSNEQTKQYVHMLNSTLTATERTICCILENYQREDGVDIPEVLQP 425

  Fly   393 FMDNQELITRNKR--IPETK 410
            ||..:..:....:  :.:||
plant   426 FMGGETFLPFKAKPVVADTK 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerRS-mNP_001262599.1 SerS 60..404 CDD:223250 114/355 (32%)
class_II_aaRS-like_core 100..394 CDD:294192 102/305 (33%)
AT5G27470NP_198099.1 PLN02678 1..451 CDD:215364 125/410 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0172
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D726296at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100275
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.720

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