DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerRS-m and SARS1

DIOPT Version :9

Sequence 1:NP_001262599.1 Gene:SerRS-m / 41862 FlyBaseID:FBgn0021750 Length:417 Species:Drosophila melanogaster
Sequence 2:NP_001317598.1 Gene:SARS1 / 6301 HGNCID:10537 Length:536 Species:Homo sapiens


Alignment Length:421 Identity:122/421 - (28%)
Similarity:201/421 - (47%) Gaps:51/421 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 VPTSA-QLDELERNVVVRHHKNNVPLIRSLIQELDAGDQHKLRQLQAE----LEQLPNATHPRLR 94
            ||.:. ..|:|..:.:.....:.:..:|.||.|.......:..:|:||    |.::.|..||.:.
Human    80 VPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAERIKLEAERFENLREIGNLLHPSVP 144

  Fly    95 DYGEEPRELAQYVHRQLTPQSRLKEFS--ELARALNLYRMDHLGNYTGHKSYYLTGQLATLEQAI 157
            ...:|  ::...|.|.....:..|::|  :|...::.:..:......|.:.|:|.|.|..||||:
Human   145 ISNDE--DVDNKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLVFLEQAL 207

  Fly   158 IQYALQAVTEHGFKLISVPDILPKEVIESCGMRTEGERTQVYKL---------DTG---ECLSGT 210
            |||||:.:...|:..|..|..:.|||::.....::.:. ::||:         |..   :.|..|
Human   208 IQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDE-ELYKVIGKGSEKSDDNSYDEKYLIAT 271

  Fly   211 SEMALAGFFANKLLSEDQLPLKVTAVSRCYRAET-SGLQEEKGIYRVHQFNKVEMFAICT--EEQ 272
            ||..:|....::.|..:.||:|...:|.|:|.|. |..::.:||:|||||.|:|.|...:  :.:
Human   272 SEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNK 336

  Fly   273 SEAELEEFKNIEVDLFRRLGLNFRLLDMPPCELGAPAYQKYDIEAWMPGRQMWGEISSCSNCTDY 337
            |....||......:.::.||:.:.::::....|...|.:|.|:|||.||...:.|:.||||||||
Human   337 SWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDY 401

  Fly   338 QARRLGIRYRRS------------------------ADGQILHAHTINGTATAIPRLLIALLESY 378
            |||||.|||.::                        :..::...|.:|.|..|..|.:.|:||:|
Human   402 QARRLRIRYGQTKKMMDKRKNNLHLSTQNKLEASLFSPKKVEFVHMLNATMCATTRTICAILENY 466

  Fly   379 QKEDGIEIPAVLRPFMDN--QELITRNKRIP 407
            |.|.||.:|..|:.||..  ||||...|..|
Human   467 QTEKGITVPEKLKEFMPPGLQELIPFVKPAP 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerRS-mNP_001262599.1 SerS 60..404 CDD:223250 116/390 (30%)
class_II_aaRS-like_core 100..394 CDD:294192 98/334 (29%)
SARS1NP_001317598.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0172
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S479
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D495094at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100275
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.670

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