DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SerRS-m and sars-2

DIOPT Version :10

Sequence 1:NP_524365.1 Gene:SerRS-m / 41862 FlyBaseID:FBgn0021750 Length:417 Species:Drosophila melanogaster
Sequence 2:NP_500549.1 Gene:sars-2 / 177200 WormBaseID:WBGene00005662 Length:441 Species:Caenorhabditis elegans


Alignment Length:418 Identity:152/418 - (36%)
Similarity:234/418 - (55%) Gaps:59/418 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 RRQRSHDAKAVE-----APIHRP------VPTSAQLDELERNVVVRHHKNNVPLIR---SLIQEL 67
            ||..|.:|...|     .|:.||      :.....|:.:..|::.|....::..:.   ::||::
 Worm    21 RRFTSSEASTSEESSSAPPVMRPDLNFEFLLDEKNLEAIRENILNRKGVGDIDKVHKKWAVIQKM 85

  Fly    68 ---------DAGDQHKLRQLQAELEQ----LPNATH---PR--------LRDYGEEPRELAQYVH 108
                     .|..:.|.:||..||..    :||.|.   ||        :.::||:..:      
 Worm    86 MKSGEKQTNGAVSEQKYKQLWDELYDEAILIPNMTQDGVPRGSEDQAKIVAEWGEKRED------ 144

  Fly   109 RQLTPQSRLKEFSELARALNLYRMDHLGNYTGHKSYYLTGQLATLEQAIIQYALQAVTEHGFKLI 173
            ..||.:..::.:..|.         |..:.:|.:||...|.||:||:|::.||.:.|...||:.|
 Worm   145 ECLTAEKLVQTWRSLL---------HPTDASGQRSYVFLGALASLEKALLDYAHERVCALGFRPI 200

  Fly   174 SVPDILPKEVIESCGMRTEGERTQVYKLDTGEC---LSGTSEMALAGFFANKLLSEDQLPLKVTA 235
            :||||:..||.::||:....:....|.|...|.   ||||:||.:|.|...:..::||||:::.:
 Worm   201 TVPDIVSGEVTQACGVMQRSDHPIQYTLAGEESHTKLSGTAEMGIAAFLRGRTFNQDQLPIRLVS 265

  Fly   236 VSRCYRAETSGLQEEKGIYRVHQFNKVEMFAICTEEQSEAELEEFKNIEVDLFRRLGLNFRLLDM 300
            :|||:|.|.|....|..:||||:|:|||||.:.|.|||.|||:....::...|:.||::.|.|:|
 Worm   266 LSRCFRTEISKSASEAKLYRVHEFSKVEMFVVSTPEQSAAELDYLVEVQKGTFQALGVHCRQLEM 330

  Fly   301 PPCELGAPAYQKYDIEAWMPGRQMWGEISSCSNCTDYQARRLGIRYRRSADGQILHAHTINGTAT 365
            |..||||.|.:|:|||||||||:::||:||.|||||:|:|||||:| ::|||...:|||.||||.
 Worm   331 PSEELGASAARKFDIEAWMPGRKLYGEVSSASNCTDFQSRRLGIKY-KTADGTTKYAHTCNGTAL 394

  Fly   366 AIPRLLIALLESYQKE-DGI-EIPAVLR 391
            |..|.||::||::|.: .|: |:|..||
 Worm   395 ASTRALISVLETFQNDKKGLGELPEPLR 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerRS-mNP_524365.1 class_II_aaRS-like_core 100..394 CDD:444800 126/297 (42%)
sars-2NP_500549.1 class_II_aaRS-like_core 131..423 CDD:444800 128/308 (42%)

Return to query results.
Submit another query.