DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sra-1 and Cyfip2

DIOPT Version :9

Sequence 1:NP_650447.1 Gene:Sra-1 / 41861 FlyBaseID:FBgn0038320 Length:1291 Species:Drosophila melanogaster
Sequence 2:XP_006534524.1 Gene:Cyfip2 / 76884 MGIID:1924134 Length:1278 Species:Mus musculus


Alignment Length:1305 Identity:845/1305 - (64%)
Similarity:1026/1305 - (78%) Gaps:58/1305 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTEKITLADALSNVEVLDELSLPDEQPCIEAQPCSIIYKANFDTNFEDRNGFVTGIAKYIEEATT 65
            ||..:||.||||||::|:||.|||:|||||..|.||:|:|||||||||||.||||||:|||:||.
Mouse     1 MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYIEQATV 65

  Fly    66 HANLNVLLDEGQKHAVMLYTWRCCSRAIPQPKSNEQPNRVEIYEKTVEVLAPEVNKLLNFMYFQR 130
            |:::|.:|:||..:||||||||.|||||||.|.|||||||||||||||||.|||.||:.||||||
Mouse    66 HSSMNEMLEEGHDYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVTKLMKFMYFQR 130

  Fly   131 KAIEAFSGEVKRLCHAEKRKDFVSEAYLLTLGKFINMFAVLDELKNMKSSVKNDYSTYRRAAQFL 195
            ||||.|..|||||||||:||||||||||||||||||||||||||||||.|||||:|.|:||||||
Mouse   131 KAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCSVKNDHSAYKRAAQFL 195

  Fly   196 KVMSDSHTLQESQNLSMFLATQNKIRDTVKDTLEKIVGYEDLLSDVVNICVHMFETKMYLTPEEK 260
            :.|:|..::|||||||||||..|:|...:...||.|.|||:||:|:|||||..:|.||||||.||
Mouse   196 RKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLADIVNICVDYYENKMYLTPSEK 260

  Fly   261 HMLVKVMGFGLFLMDSDACNINKLDQKKKIRLDRIDRIFKNLEVVPLFGDMQIAPFNYIKRSKHF 325
            |||:|||||||:|||.:..||.|||.||:|.|.:||:.||.|:||||||||||....|||.|.|:
Mouse   261 HMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFKQLQVVPLFGDMQIELARYIKTSAHY 325

  Fly   326 D--SSKWPLSSSNAISPQADLMVHLPQIREDHVKYISELARYTNEVTTT---VKENPSDAENRIT 385
            :  .|||..:.| :||||.::...:.|||:||:::|||||||:|....|   :....||.|.|..
Mouse   326 EENKSKWTCTQS-SISPQYNICEQMVQIRDDHIRFISELARYSNSEVVTGSGLDSQKSDEEYREL 389

  Fly   386 ADLALRGLQLLSEWTSVVTELYSWKLLHPTDHHQNKECPVEAEEYERATRYNYTSEEKFALIEVI 450
            .|||||||||||:|::.|.|:|||||:||||...||:||..|||||||||||||||||||.:|||
Mouse   390 FDLALRGLQLLSKWSAHVMEVYSWKLVHPTDKFCNKDCPGTAEEYERATRYNYTSEEKFAFVEVI 454

  Fly   451 AMIKGLQVLMARIETVLCEAIRRNIYSELQDFVQLSLREPLRKAVKNKKDLIRSIIMSVRETSAD 515
            ||||||||||.|:|:|..:|||..||:.||||.|::||||||:||:.||:::.|::.::|:|..|
Mouse   455 AMIKGLQVLMGRMESVFNQAIRNTIYAALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICD 519

  Fly   516 WQKGYEPTDDPVAKGKKDPDGGFRIQVPRLNVGPSSTQ-------------------------LY 555
            |:.|.||.:||..:|:|||.|||.|:|||..|||||||                         ||
Mouse   520 WEGGREPPNDPCLRGEKDPKGGFDIKVPRRAVGPSSTQACQWSPRALFHPTGGTQGRRGCRSLLY 584

  Fly   556 MVRTMLESLIADKSGGKRTLRKDIDGNCLLQIDTFHKTSFYWSYLLNFSDTLQKCCDLSQLWYRE 620
            |||||||||||||||.|:|||..:||..:|.|:.|||.||::::|||.|:.||:||||||||:||
Mouse   585 MVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKQSFFFTHLLNISEALQQCCDLSQLWFRE 649

  Fly   621 FYLEMTMGRKVNKCLVRHQHNEECKDLITMEKRIQFPIEMSMPWILTDHILQTKEPSMMEFVLYP 685
            |:||:||||                       |||||||||||||||||||:||||||||:||||
Mouse   650 FFLELTMGR-----------------------RIQFPIEMSMPWILTDHILETKEPSMMEYVLYP 691

  Fly   686 LDLYNDSAYYALTVFRKQFLYDEVEAEVNLCFDQFVYKLSEQIFAHYKQLAGSIFLDKRFRLECE 750
            |||||||||||||.|:|||||||:|||||||||||||||::||||:||.:|||:.||||||.||:
Mouse   692 LDLYNDSAYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGSVLLDKRFRAECK 756

  Fly   751 VLGFNFQSYPRNNRYETLLKQRHVQLLGRSIDLNKLITQRINANMHKSIELAISRFEGNDITGIV 815
            ..|. ...||.:||||||||||||||||||||||:||||||:|.|:||::.||||||..|:|.||
Mouse   757 NYGV-IIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLDQAISRFESEDLTSIV 820

  Fly   816 ELEGLLEANRICHKLLSKYLALDNFDGMVKEANHNVLAPYGRITLHVFVELNYDFLVNYCYNAAT 880
            |||.|||.||:.|:||.|::.||:||.|.:||||||.|||||||||||.|||:|||.|||||.:|
Mouse   821 ELEWLLEINRLTHRLLCKHMTLDSFDAMFREANHNVSAPYGRITLHVFWELNFDFLPNYCYNGST 885

  Fly   881 NRFIRTKVNLSSSQAIQREKPPQMSHYYLWGSKQLNAAYSTQYGQYTGFVGSPHFHAMCRLLGYQ 945
            |||:||.:..  :|..||:||..:..|||:|||.||.|||..|..|..|||.|||..:|||||||
Mouse   886 NRFVRTAIPF--TQEPQRDKPANVQPYYLYGSKPLNIAYSHIYSSYRNFVGPPHFKTICRLLGYQ 948

  Fly   946 GIAVVMDIILKDIVKPLIQGSLLQFTKTLMIAMPKSCKLPRCEYGSPGVLSYYQAHLTDIVQYPD 1010
            ||||||:.:|| |||.|:||::||:.|||:..|||.|:|||.||||||:|.::...|.||::|.:
Mouse   949 GIAVVMEELLK-IVKSLLQGTILQYVKTLIEVMPKICRLPRHEYGSPGILEFFHHQLKDIIEYAE 1012

  Fly  1011 AKTELFQSFREFGNSIIFCLLIEQALSQEEVCDLLHAALFQNIFPRPFCKENEKPEAKQKRLEAQ 1075
            .||::|||.||.||:|:|||||||||||||||||||||.||||.||.:.||.|:.|.:.|||||:
Mouse  1013 LKTDVFQSLREVGNAILFCLLIEQALSQEEVCDLLHAAPFQNILPRVYIKEGERLEVRMKRLEAK 1077

  Fly  1076 FANLQIVSNVEKIGTAKQAMIAREGDLLTRERLCCGLSIFEVILNRVKSYLDDPVWCGPPPANGI 1140
            :|.|.:|..:|::||.:|..|||||||||:||||||||:|||||.|::|||.||:|.||||.||:
Mouse  1078 YAPLHLVPLIERLGTPQQIAIAREGDLLTKERLCCGLSMFEVILTRIRSYLQDPIWRGPPPTNGV 1142

  Fly  1141 IHVDECSEFHRLWSALQFVYCIPVRGTEYTIEELFGEGLNWAGCVMIVLLGQQRRFEALDFCYHI 1205
            :|||||.||||||||:||||||||...|:|.|:.||:|||||||.:||||||||||:..|||||:
Mouse  1143 MHVDECVEFHRLWSAMQFVYCIPVGTNEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHL 1207

  Fly  1206 LRVQRVDGKDEDVKGIQLKRMVDRIRRFQVLNSQIFSILNKYLKGGDGEGSNVEHVRCFPPPQHP 1270
            |:|||.|||||.:|.:.||:|.||||::|:||:::|:|||||:|..:.:.|.|||||||.||.|.
Mouse  1208 LKVQRQDGKDEIIKNVPLKKMADRIRKYQILNNEVFAILNKYMKSVETDSSTVEHVRCFQPPIHQ 1272

  Fly  1271 SVISS 1275
            |:.::
Mouse  1273 SLATT 1277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sra-1NP_650447.1 DUF1394 89..>267 CDD:399855 135/177 (76%)
FragX_IP 386..1244 CDD:399175 568/882 (64%)
Cyfip2XP_006534524.1 DUF1394 65..>267 CDD:399855 148/201 (74%)
FragX_IP 388..1246 CDD:399175 568/884 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837775
Domainoid 1 1.000 1165 1.000 Domainoid score I14
eggNOG 1 0.900 - - E1_KOG3534
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7936
Inparanoid 1 1.050 1718 1.000 Inparanoid score I71
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54601
OrthoDB 1 1.010 - - D108507at2759
OrthoFinder 1 1.000 - - FOG0003030
OrthoInspector 1 1.000 - - otm43109
orthoMCL 1 0.900 - - OOG6_102235
Panther 1 1.100 - - O PTHR12195
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2470
SonicParanoid 1 1.000 - - X2020
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.800

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