DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sra-1 and gex-2

DIOPT Version :9

Sequence 1:NP_650447.1 Gene:Sra-1 / 41861 FlyBaseID:FBgn0038320 Length:1291 Species:Drosophila melanogaster
Sequence 2:NP_499949.2 Gene:gex-2 / 176885 WormBaseID:WBGene00001579 Length:1262 Species:Caenorhabditis elegans


Alignment Length:1295 Identity:668/1295 - (51%)
Similarity:890/1295 - (68%) Gaps:48/1295 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTEKITLADALSNVEVLDELSLPDEQPCIEAQPCSIIYKANFDTNFEDRNGFVTGIAKYIEEATT 65
            |...:|:.||:|||.:||.|::||:.|.|||:...::|::|||||||||:.||||||||.||||.
 Worm     1 MNANVTVDDAISNVNLLDTLAIPDDLPDIEARALPLLYRSNFDTNFEDRSAFVTGIAKYSEEATR 65

  Fly    66 HANLNVLLDEGQKHAVMLYTWRCCSRAIPQPKSNEQPNRVEIYEKTVEVLAPEVNKLLNFMYFQR 130
            ||..|.:|.||.:||..:|||||||||:|..|||:||||.||.|..||||.|||:||.:||.|..
 Worm    66 HAQFNDMLSEGLQHAANMYTWRCCSRAVPMAKSNDQPNRTEINEMVVEVLKPEVSKLGSFMRFTL 130

  Fly   131 KAIEAFSGEVKRLCHAEKRKDFVSEAYLLTLGKFINMFAVLDELKNMKSSVKNDYSTYRRAAQFL 195
            .||:.|..||:||||:|||:||||||||||||:|||||||||||||||:|:|||:||:|||:|||
 Worm   131 TAIQRFCEEVRRLCHSEKRRDFVSEAYLLTLGRFINMFAVLDELKNMKASIKNDFSTFRRASQFL 195

  Fly   196 KVMSDSHTLQESQNLSMFLATQNKIRDTVKDTLEKIVGYEDLLSDVVNICVHMFETKMYLTPEEK 260
            ..|||:..:.:.|||||||||||||:|.:|..::.|.|||:||.||||||.||:|.::||:|.||
 Worm   196 TAMSDTQAVHDMQNLSMFLATQNKIKDDLKLQMKTIEGYEELLCDVVNICAHMYEHQLYLSPNEK 260

  Fly   261 HMLVKVMGFGLFLMDSDACNINKLDQKKKIRLDRIDRIFKNLEVVPLFGDMQIAPFNYIKRSKHF 325
            ||.|||:.|.|||||.||.|:.||||||::.:.|:|:|||.||||||:|||||.||.:::||.|:
 Worm   261 HMFVKVIAFSLFLMDGDAANVAKLDQKKRLSISRLDKIFKTLEVVPLYGDMQIQPFAFVRRSSHY 325

  Fly   326 DSSKWPLSSSNAISPQADLMVHLPQIREDHVKYISELARYTNEVTTTVKENP-SDAENRITADLA 389
            :.||||||...:.....:::..:..||.||..|:::.|:..|||  .:.:.| :|:|||....||
 Worm   326 EPSKWPLSDKESDRCHVNIVEKVQSIRSDHESYVTQFAKINNEV--AICDRPGNDSENREITSLA 388

  Fly   390 LRGLQLLSEWTSVVTELYSWKLLHPTDHHQNKECPVEAEEYERATRYNYTSEEKFALIEVIAMIK 454
            |.|:|||.:|:..|.|..|||||:||:...|:|||..||||||||||||:..||.|||::|||||
 Worm   389 LSGIQLLCQWSCAVVETISWKLLNPTNPKDNRECPENAEEYERATRYNYSPAEKTALIQIIAMIK 453

  Fly   455 GLQVLMARIETVLCEAIRRNIYSELQDFVQLSLREPLRKAVKNKKDLIRSIIMSVRETSADWQKG 519
            |||.::.:.|:.:..:.|:.:|.|||.|:..::.|||:||||:||||:.||:.||:::.:|  .|
 Worm   454 GLQSMLGKTESDMSNSTRKCVYVELQAFIHHTINEPLQKAVKHKKDLLASILQSVKDSISD--AG 516

  Fly   520 YEPTDDPVAKGKKD---PDG------GFRIQVPRLNVGPSSTQLYMVRTMLESLIADK-SGGKRT 574
            .|.......||||.   |.|      ...|::||....|.||||||.||.|||||:|| .|||:.
 Worm   517 NELNRMTDVKGKKKSSAPKGDSANSSSSDIRIPRRTAAPGSTQLYMARTQLESLISDKLCGGKKI 581

  Fly   575 LRKDIDGNCLLQIDTFHKTSFYWSYLLNFSDTLQKCCDLSQLWYREFYLEMTMGRKVNKCLVRHQ 639
            |||::|...:.:|..|.:.|.:|..|...||::.:..:|||||:||||||||||           
 Worm   582 LRKELDSKTIEKISVFLRKSAHWPALFRLSDSMTEAGELSQLWFREFYLEMTMG----------- 635

  Fly   640 HNEECKDLITMEKRIQFPIEMSMPWILTDHILQTKEPSMMEFVLYPLDLYNDSAYYALTVFRKQF 704
                        :||||||||||||||||:||...|||::|..||.||||||:|.|:|..|.|||
 Worm   636 ------------QRIQFPIEMSMPWILTDYILSCNEPSLIESALYQLDLYNDAAQYSLFNFNKQF 688

  Fly   705 LYDEVEAEVNLCFDQFVYKLSEQIFAHYKQLAGSIFLDKRFRLECEVLGFNFQSYPRNNRYETLL 769
            ||||||||||||||||||||||.:|.||||||..:.|||||:.|....|...:| |...|:|:||
 Worm   689 LYDEVEAEVNLCFDQFVYKLSEMVFTHYKQLASCMLLDKRFKAEILRSGTMIRS-PSAARFESLL 752

  Fly   770 KQRHVQLLGRSIDLNKLITQRINANMHKSIELAISRFEGNDITGIVELEGLLEANRICHKLLSKY 834
            :||||||||||:|||::::||:|..:.|:::.||.:||...::.||||:.|::.||:||.|||..
 Worm   753 QQRHVQLLGRSVDLNRVVSQRVNMALLKALDAAIWKFESEPLSSIVELDMLIDTNRLCHTLLSDV 817

  Fly   835 L-ALDNFDGMVKEANHNVLAPYGRITLHVFVELNYDFLVNYCYNAATNRFIRTKVNLSSSQAIQR 898
            | ::..||.:.:||||.|.:|:||||||||.||||||:.|:.||.:|:||:|.:.....:.|  |
 Worm   818 LHSIAPFDDLFQEANHAVNSPHGRITLHVFWELNYDFVPNFVYNGSTHRFVRARHVFRKTPA--R 880

  Fly   899 EKPPQMSHYYLWGSKQLNAAYSTQYGQYTGFVGSPHFHAMCRLLGYQGIAVVMDIILKDIVKPLI 963
            |||||:...|.||||.|.||:......|:..:|:.|..|:.|||.||||||::|.:|| :...|:
 Worm   881 EKPPQVGQVYYWGSKSLMAAFMNICNAYSQCIGTQHLKAITRLLHYQGIAVILDELLK-MTNRLL 944

  Fly   964 QGSLLQFTKTLMIAMPKSCKLPRCEYGSPGVLSYYQAHLTDIVQYPDAKTELFQSFREFGNSIIF 1028
            ...:.:..:.:...|||.|||||.:|||..:|.||..||..:.:||:.|:|..|..||.||.|:|
 Worm   945 NDKIRRHVRNVFNMMPKVCKLPRSDYGSNALLQYYVHHLEAVGKYPELKSEFCQDLRELGNMIVF 1009

  Fly  1029 CLLIEQALSQEEVCDLLHAALFQNIFPRPFCKENEKPEAKQKRLEAQFANLQIVSNVEKIGTAK- 1092
            |..:|.||.|||..||..||.:....|:|..:..::...:..:||.:::.:.:...::||.... 
 Worm  1010 CQQLEVALGQEEAHDLFLAAAYTGTVPQPPARNAQEQMKQLAKLEDKYSRIHLTEIIDKISPDDG 1074

  Fly  1093 QAMIAREGDLLTRERLCCGLSIFEVILNRVKSYL-DDPVWCGPPPANGIIHVDECSEFHRLWSAL 1156
            ||.||::.:|:|:|||||||:.||..|.|:|..| .|.:|.|..|.||:..:|||.|::|::|||
 Worm  1075 QAAIAKDAELMTKERLCCGLNAFENFLVRIKQMLAADDIWTGGYPTNGVFWIDECVEWYRVYSAL 1139

  Fly  1157 QFVYCIPVR-GTEYTIEELFGEGLNWAGCVMIVLLGQQRRFEALDFCYHILRVQRVDGKDEDVKG 1220
            ||..|.|.| ..|...|||||:.|.|.|..:|.||||.||||.||||||:.||.:.|||||.:.|
 Worm  1140 QFFLCQPTRDDNEVYAEELFGDSLQWGGLTLITLLGQHRRFEVLDFCYHLHRVNKADGKDEVISG 1204

  Fly  1221 IQLKRMVDRIRRFQVLNSQIFSILNKYLKGGDGEGSNVEHVRCFPPPQHPSVISSSSHYQ 1280
            |:|.:||:||||||:||:|||.||...|...:.:.:  |.||.|.||.||:..:.::..|
 Worm  1205 IRLAKMVERIRRFQLLNNQIFIILENQLNENNDDPN--ERVREFAPPVHPNYANHAARRQ 1262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sra-1NP_650447.1 DUF1394 89..>267 CDD:399855 120/177 (68%)
FragX_IP 386..1244 CDD:399175 428/871 (49%)
gex-2NP_499949.2 DUF1394 71..>263 CDD:284554 127/191 (66%)
FragX_IP 383..1228 CDD:283615 428/873 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159679
Domainoid 1 1.000 804 1.000 Domainoid score I26
eggNOG 1 0.900 - - E1_KOG3534
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1281 1.000 Inparanoid score I71
Isobase 1 0.950 - 0 Normalized mean entropy S2358
OMA 1 1.010 - - QHG54601
OrthoDB 1 1.010 - - D108507at2759
OrthoFinder 1 1.000 - - FOG0003030
OrthoInspector 1 1.000 - - oto17504
orthoMCL 1 0.900 - - OOG6_102235
Panther 1 1.100 - - LDO PTHR12195
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2470
SonicParanoid 1 1.000 - - X2020
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.750

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