DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sra-1 and cyfip1

DIOPT Version :9

Sequence 1:NP_650447.1 Gene:Sra-1 / 41861 FlyBaseID:FBgn0038320 Length:1291 Species:Drosophila melanogaster
Sequence 2:XP_004911869.1 Gene:cyfip1 / 101734874 XenbaseID:XB-GENE-1194389 Length:1253 Species:Xenopus tropicalis


Alignment Length:1281 Identity:833/1281 - (65%)
Similarity:1029/1281 - (80%) Gaps:34/1281 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTEKITLADALSNVEVLDELSLPDEQPCIEAQPCSIIYKANFDTNFEDRNGFVTGIAKYIEEATT 65
            ||.::||.||||||::|:||.|||:|||||..|.||:::.||:|||||||.||||||:|||:||.
 Frog     1 MTTQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSILFQPNFNTNFEDRNAFVTGIARYIEQATV 65

  Fly    66 HANLNVLLDEGQKHAVMLYTWRCCSRAIPQPKSNEQPNRVEIYEKTVEVLAPEVNKLLNFMYFQR 130
            |:.:|.:|:|||::|:||||||.|||||||.|.||||||||||||||:||.|||.||:|||||||
 Frog    66 HSGMNEMLEEGQEYAIMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVDVLEPEVTKLMNFMYFQR 130

  Fly   131 KAIEAFSGEVKRLCHAEKRKDFVSEAYLLTLGKFINMFAVLDELKNMKSSVKNDYSTYRRAAQFL 195
            .|.|.|..|||||||||:||||||||||:|||||||||||||||||||.|||||:|.|:||||||
 Frog   131 NATERFCAEVKRLCHAERRKDFVSEAYLMTLGKFINMFAVLDELKNMKCSVKNDHSAYKRAAQFL 195

  Fly   196 KVMSDSHTLQESQNLSMFLATQNKIRDTVKDTLEKIVGYEDLLSDVVNICVHMFETKMYLTPEEK 260
            :.|:|..::|||||||||||..|||..:::..||.|.|||:||:|:||:||..:|.||||||.||
 Frog   196 RKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVIPGYEELLADIVNLCVDYYENKMYLTPGEK 260

  Fly   261 HMLVKVMGFGLFLMDSDACNINKLDQKKKIRLDRIDRIFKNLEVVPLFGDMQIAPFNYIKRSKHF 325
            |||:|||||||:|||....||.|||.||:|.|::||:.||.|:||||||||||....|||.|.|:
 Frog   261 HMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLNKIDKFFKQLQVVPLFGDMQIELARYIKTSAHY 325

  Fly   326 D--SSKWPLSSSNAISPQADLMVHLPQIREDHVKYISELARYTN-EVTT---TVKENPSDAENRI 384
            :  .|:|..:||:: |||.::...:.||||||:::|||||||:| ||.|   ..:...:|||.|.
 Frog   326 EENKSRWTCTSSSS-SPQYNICEQMIQIREDHMRFISELARYSNSEVVTGSGRQEAQKTDAEYRK 389

  Fly   385 TADLALRGLQLLSEWTSVVTELYSWKLLHPTDHHQNKECPVEAEEYERATRYNYTSEEKFALIEV 449
            ..||:|:||||||:|::.|.|:|||||:||||.:.||:||..||||||||||||||||||||:||
 Frog   390 LFDLSLQGLQLLSQWSAHVMEVYSWKLVHPTDKYSNKDCPDNAEEYERATRYNYTSEEKFALVEV 454

  Fly   450 IAMIKGLQVLMARIETVLCEAIRRNIYSELQDFVQLSLREPLRKAVKNKKDLIRSIIMSVRETSA 514
            |||||||||||.|:|:|...|||..||:|||||.|::||||||:|:|.||::|:|::.::|:|..
 Frog   455 IAMIKGLQVLMGRMESVFNHAIRHTIYAELQDFAQVTLREPLRQAIKKKKNVIQSVLQAIRKTVC 519

  Fly   515 DWQKGYEPTDDPVAKGKKDPDGGFRIQVPRLNVGPSSTQLYMVRTMLESLIADKSGGKRTLRKDI 579
            ||..|.||.:||..:|:|||..||.|:|||..||||||||||||||||||||||||.|:|||..:
 Frog   520 DWGAGCEPFNDPALRGEKDPKSGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSL 584

  Fly   580 DGNCLLQIDTFHKTSFYWSYLLNFSDTLQKCCDLSQLWYREFYLEMTMGRKVNKCLVRHQHNEEC 644
            :|..:|.|:.||:.||::::|:|||:|||:||||||||:|||:||:||||               
 Frog   585 EGPTILDIEKFHRESFFYTHLINFSETLQQCCDLSQLWFREFFLELTMGR--------------- 634

  Fly   645 KDLITMEKRIQFPIEMSMPWILTDHILQTKEPSMMEFVLYPLDLYNDSAYYALTVFRKQFLYDEV 709
                    |||||||||||||||||||:|||.||||:|||.||||||||:||||.|:|||||||:
 Frog   635 --------RIQFPIEMSMPWILTDHILETKEASMMEYVLYSLDLYNDSAHYALTKFKKQFLYDEI 691

  Fly   710 EAEVNLCFDQFVYKLSEQIFAHYKQLAGSIFLDKRFRLECEVLGFNFQSYPRNNRYETLLKQRHV 774
            |||||||||||||||::|||||||.:||.:.||||.|.:|:..|.:. |.|.:|||:||||||||
 Frog   692 EAEVNLCFDQFVYKLADQIFAHYKVVAGGLLLDKRLRADCKNQGASI-SQPTSNRYDTLLKQRHV 755

  Fly   775 QLLGRSIDLNKLITQRINANMHKSIELAISRFEGNDITGIVELEGLLEANRICHKLLSKYLALDN 839
            ||||||||||:||||||:|.:::|:||||.|||..|:|.||||:||:|.||:.||||||||.||:
 Frog   756 QLLGRSIDLNRLITQRISAALYRSLELAIGRFESEDLTSIVELDGLIEINRLTHKLLSKYLTLDS 820

  Fly   840 FDGMVKEANHNVLAPYGRITLHVFVELNYDFLVNYCYNAATNRFIRTKVNLSSSQAIQREKPPQM 904
            ||.|.:||||||.|||||||||||.|||||||.|||||.:|.||:||.  :..||..||:|.|..
 Frog   821 FDAMFREANHNVSAPYGRITLHVFWELNYDFLPNYCYNGSTYRFVRTV--MPFSQEFQRDKQPNA 883

  Fly   905 SHYYLWGSKQLNAAYSTQYGQYTGFVGSPHFHAMCRLLGYQGIAVVMDIILKDIVKPLIQGSLLQ 969
            ...||:|||.||.|||:.:..|..|||.|||..:|||||||||||||:.:|| :||.|:||::||
 Frog   884 QPQYLFGSKLLNLAYSSMFSYYRHFVGPPHFKVICRLLGYQGIAVVMEELLK-VVKSLLQGTILQ 947

  Fly   970 FTKTLMIAMPKSCKLPRCEYGSPGVLSYYQAHLTDIVQYPDAKTELFQSFREFGNSIIFCLLIEQ 1034
            :.||||..|||.|:|||.||||||:|.::...|.|||:|.:.||..||:.||.||:::|||||||
 Frog   948 YVKTLMEVMPKICRLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNTLLFCLLIEQ 1012

  Fly  1035 ALSQEEVCDLLHAALFQNIFPRPFCKENEKPEAKQKRLEAQFANLQIVSNVEKIGTAKQAMIARE 1099
            :||.||||||||||.||||.||...||.|:.|||.||||:::|.|.:|..:|::||.:|..||||
 Frog  1013 SLSLEEVCDLLHAAPFQNILPRVHVKEGERLEAKMKRLESKYAPLHLVPLIERLGTPQQIAIARE 1077

  Fly  1100 GDLLTRERLCCGLSIFEVILNRVKSYLDDPVWCGPPPANGIIHVDECSEFHRLWSALQFVYCIPV 1164
            |||||:||||||||:|||||.||:::|||.:|.||.|:||::|||||.||||||||:||||||||
 Frog  1078 GDLLTKERLCCGLSMFEVILTRVQTFLDDAIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCIPV 1142

  Fly  1165 RGTEYTIEELFGEGLNWAGCVMIVLLGQQRRFEALDFCYHILRVQRVDGKDEDVKGIQLKRMVDR 1229
            ...|:|:|:.||:|||||||::|.||||.|||:.||||||:|:||:.|||||.:|.:.||:||:|
 Frog  1143 GTHEFTVEQCFGDGLNWAGCMIIALLGQHRRFDVLDFCYHLLKVQKHDGKDEVIKNVPLKKMVER 1207

  Fly  1230 IRRFQVLNSQIFSILNKYLKGGDGEGSNVEHVRCFPPPQHPSVISS 1275
            ||:||:||.:||.||:||.|..|||.:.|||||||.||.|.|:.|:
 Frog  1208 IRKFQILNDEIFGILDKYSKSVDGENTPVEHVRCFQPPIHQSLASN 1253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sra-1NP_650447.1 DUF1394 89..>267 CDD:399855 132/177 (75%)
FragX_IP 386..1244 CDD:399175 558/857 (65%)
cyfip1XP_004911869.1 FragX_IP 404..1222 CDD:368696 549/844 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 1154 1.000 Domainoid score I15
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1708 1.000 Inparanoid score I70
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D108507at2759
OrthoFinder 1 1.000 - - FOG0003030
OrthoInspector 1 1.000 - - otm48242
Panther 1 1.100 - - LDO PTHR12195
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2020
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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