DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sra-1 and cyfip2

DIOPT Version :9

Sequence 1:NP_650447.1 Gene:Sra-1 / 41861 FlyBaseID:FBgn0038320 Length:1291 Species:Drosophila melanogaster
Sequence 2:NP_001103523.1 Gene:cyfip2 / 100126215 XenbaseID:XB-GENE-922699 Length:1253 Species:Xenopus tropicalis


Alignment Length:1280 Identity:844/1280 - (65%)
Similarity:1026/1280 - (80%) Gaps:33/1280 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTEKITLADALSNVEVLDELSLPDEQPCIEAQPCSIIYKANFDTNFEDRNGFVTGIAKYIEEATT 65
            ||..:||.||||||::|:||.|||:|||||..|.||:|:|||||||||||.||||||:|||:||.
 Frog     1 MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYIEQATV 65

  Fly    66 HANLNVLLDEGQKHAVMLYTWRCCSRAIPQPKSNEQPNRVEIYEKTVEVLAPEVNKLLNFMYFQR 130
            |:::|.:|:|||::||||||||.|||||||.|.|||||||||||||||||.|||.||:.||||||
 Frog    66 HSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVTKLMKFMYFQR 130

  Fly   131 KAIEAFSGEVKRLCHAEKRKDFVSEAYLLTLGKFINMFAVLDELKNMKSSVKNDYSTYRRAAQFL 195
            ||||.|..|||||||||:||||||||||||||||||||||||||||||.|||||:|.|:||||||
 Frog   131 KAIERFCNEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCSVKNDHSAYKRAAQFL 195

  Fly   196 KVMSDSHTLQESQNLSMFLATQNKIRDTVKDTLEKIVGYEDLLSDVVNICVHMFETKMYLTPEEK 260
            :.|:|..::|||||||||||..|:|...:...||.|.|||:||:|:|||||..:|.||||||.||
 Frog   196 RKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLADIVNICVDYYENKMYLTPSEK 260

  Fly   261 HMLVKVMGFGLFLMDSDACNINKLDQKKKIRLDRIDRIFKNLEVVPLFGDMQIAPFNYIKRSKHF 325
            |||:|||||||:|||.:..||.|||.||:|.|.:||:.||.|:||||||||||....||:.|.|:
 Frog   261 HMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFKQLQVVPLFGDMQIELARYIETSAHY 325

  Fly   326 D--SSKWPLSSSNAISPQADLMVHLPQIREDHVKYISELARYTNEVTTT---VKENPSDAENRIT 385
            :  .|||..:.| :||||.::...:.|||:||:::|||||||:|....|   :....||.|.|..
 Frog   326 EENKSKWTCTQS-SISPQYNICEQMVQIRDDHIRFISELARYSNSEVVTGSGLDSQKSDEEYREL 389

  Fly   386 ADLALRGLQLLSEWTSVVTELYSWKLLHPTDHHQNKECPVEAEEYERATRYNYTSEEKFALIEVI 450
            .|||||||||||:|::.|.|:|||||:||||...||:||..|||||||||||||||||||.:|||
 Frog   390 FDLALRGLQLLSKWSAHVMEVYSWKLVHPTDKFCNKDCPGTAEEYERATRYNYTSEEKFAFVEVI 454

  Fly   451 AMIKGLQVLMARIETVLCEAIRRNIYSELQDFVQLSLREPLRKAVKNKKDLIRSIIMSVRETSAD 515
            ||:|||||||.|:|:|..:|||..||:.||||.|.|||||||:||:.||:::.|::.::|:|..|
 Frog   455 AMVKGLQVLMGRMESVFNQAIRNTIYAALQDFAQSSLREPLRQAVRKKKNVLISVLQAIRKTVCD 519

  Fly   516 WQKGYEPTDDPVAKGKKDPDGGFRIQVPRLNVGPSSTQLYMVRTMLESLIADKSGGKRTLRKDID 580
            |:.|.||.:||..:|:|||.|||.|:|||..||||||||||||||||||||||||.|:|||..:|
 Frog   520 WEGGREPPNDPCLRGEKDPKGGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLD 584

  Fly   581 GNCLLQIDTFHKTSFYWSYLLNFSDTLQKCCDLSQLWYREFYLEMTMGRKVNKCLVRHQHNEECK 645
            |..:..|:.|||.||::::|||||:.||:||||||||:|||:||:||||                
 Frog   585 GPIVQAIEEFHKQSFFFTHLLNFSEALQQCCDLSQLWFREFFLELTMGR---------------- 633

  Fly   646 DLITMEKRIQFPIEMSMPWILTDHILQTKEPSMMEFVLYPLDLYNDSAYYALTVFRKQFLYDEVE 710
                   |||||||||||||||||||:||||||||:|||||||||||||||||.|:|||||||:|
 Frog   634 -------RIQFPIEMSMPWILTDHILETKEPSMMEYVLYPLDLYNDSAYYALTKFKKQFLYDEIE 691

  Fly   711 AEVNLCFDQFVYKLSEQIFAHYKQLAGSIFLDKRFRLECEVLGFNFQSYPRNNRYETLLKQRHVQ 775
            |||||||||||||||:||||:||.::||:.||||||.||:..|. ...||.:|||||||||||||
 Frog   692 AEVNLCFDQFVYKLSDQIFAYYKAMSGSVLLDKRFRAECKNYGV-IIPYPPSNRYETLLKQRHVQ 755

  Fly   776 LLGRSIDLNKLITQRINANMHKSIELAISRFEGNDITGIVELEGLLEANRICHKLLSKYLALDNF 840
            |||||||||:||||||:|.|:||::.||||||..|:|.|||||.||:.||:.|:||||:|.||:|
 Frog   756 LLGRSIDLNRLITQRISAAMYKSLDQAISRFESEDLTSIVELEWLLDINRLTHRLLSKHLTLDSF 820

  Fly   841 DGMVKEANHNVLAPYGRITLHVFVELNYDFLVNYCYNAATNRFIRTKVNLSSSQAIQREKPPQMS 905
            |.|.:||||||.|||||.|||||.|||:|||.|||||.:||||:||.:..  :|..||:||..:.
 Frog   821 DAMFREANHNVSAPYGRNTLHVFWELNFDFLPNYCYNGSTNRFVRTAIPF--TQEPQRDKPANVQ 883

  Fly   906 HYYLWGSKQLNAAYSTQYGQYTGFVGSPHFHAMCRLLGYQGIAVVMDIILKDIVKPLIQGSLLQF 970
            .|||:|||.||.|||..|..|..|||.|||..:|||||||||||||:.:|| |||.|:||::||:
 Frog   884 PYYLYGSKPLNIAYSHIYSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLK-IVKSLLQGTILQY 947

  Fly   971 TKTLMIAMPKSCKLPRCEYGSPGVLSYYQAHLTDIVQYPDAKTELFQSFREFGNSIIFCLLIEQA 1035
            .|||:..|||.|:|||.||||||:|.::...|.||::|.:.||::|||.||.||:|:||||||||
 Frog   948 VKTLIEVMPKICRLPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQA 1012

  Fly  1036 LSQEEVCDLLHAALFQNIFPRPFCKENEKPEAKQKRLEAQFANLQIVSNVEKIGTAKQAMIAREG 1100
            |||||||||||||.||||.||.:.||.|:.|.:.|||||::|.|.:|..:|::||.:|..|||||
 Frog  1013 LSQEEVCDLLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREG 1077

  Fly  1101 DLLTRERLCCGLSIFEVILNRVKSYLDDPVWCGPPPANGIIHVDECSEFHRLWSALQFVYCIPVR 1165
            ||||:||||||||:|||||.|::|||.||:|.||||.||::|||||.|.||||||:||||||||.
 Frog  1078 DLLTKERLCCGLSMFEVILTRIRSYLQDPIWRGPPPTNGVMHVDECVELHRLWSAMQFVYCIPVG 1142

  Fly  1166 GTEYTIEELFGEGLNWAGCVMIVLLGQQRRFEALDFCYHILRVQRVDGKDEDVKGIQLKRMVDRI 1230
            ..|:|.|:.||:|||||||.:||||||||||:..|||||:|:|||.|||||.:|.:.||:|.|||
 Frog  1143 TNEFTAEQCFGDGLNWAGCAIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPLKKMADRI 1207

  Fly  1231 RRFQVLNSQIFSILNKYLKGGDGEGSNVEHVRCFPPPQHPSVISS 1275
            |::|:||::||::||||:|..:.:.|.|||||||.||.|.|:.::
 Frog  1208 RKYQILNNEIFAVLNKYMKSVESDSSTVEHVRCFQPPIHQSLATT 1252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sra-1NP_650447.1 DUF1394 89..>267 CDD:399855 135/177 (76%)
FragX_IP 386..1244 CDD:399175 568/857 (66%)
cyfip2NP_001103523.1 DUF1394 65..>267 CDD:284554 149/201 (74%)
FragX_IP 388..1221 CDD:283615 568/859 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 1154 1.000 Domainoid score I15
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H7936
Inparanoid 1 1.050 1708 1.000 Inparanoid score I70
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D108507at2759
OrthoFinder 1 1.000 - - FOG0003030
OrthoInspector 1 1.000 - - otm48242
Panther 1 1.100 - - O PTHR12195
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2020
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.160

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