DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fkbp39 and AT3G12340

DIOPT Version :9

Sequence 1:NP_524364.2 Gene:Fkbp39 / 41860 FlyBaseID:FBgn0013269 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_187840.7 Gene:AT3G12340 / 820412 AraportID:AT3G12340 Length:499 Species:Arabidopsis thaliana


Alignment Length:495 Identity:123/495 - (24%)
Similarity:193/495 - (38%) Gaps:149/495 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FWGLNMKPERKYS-----QTIIKSFHISGVALDKGQEAKLYL----AAEKQEYIVATVT-KAIPQ 58
            |||:.:||.:.::     .|.|:..|:|...|..|......:    ...|...::..:| ..:..
plant     3 FWGVEVKPGKTFTLKNNEATGIRRLHLSQATLGHGTATNRSILQCNVGNKSPLLLCVLTPDKVDS 67

  Fly    59 VALDLNFSKGDRIMFYTAGDASVSLLGYL--HDIDSEDDEDDDQMTIENLLNSKAIKNSKKSEDD 121
            ..|:|.|.:.|.::|...|..||.|.||.  .......::|:.:...|:::::..   .|.|.||
plant    68 CQLNLEFEETDEVIFSVIGPRSVHLTGYFLGRSTGFRPNDDESESFGEDIVDTDM---EKGSSDD 129

  Fly   122 EDENESGEEDEE---------DTDDDSQIIEEY----ESFLENGE--------EEDDDDVDEDNE 165
            .|.::|...|::         .||||...|:|.    :...:||:        :..|.|.||.:.
plant   130 YDYSDSFINDDDPAVRGSHVSSTDDDEISIKEMTAKTKEKKKNGKGRRLRKKFQVSDSDSDETSA 194

  Fly   166 ESGEEDEQDSDDSEAEEEQPK-AKV---------------------------------------- 189
            .:.|...:||.:......:|| |||                                        
plant   195 RADESSNEDSVEVLNNGNEPKIAKVHSSESPLPSRVTRSKARKSTLESGEPAKCEKTFEAKINTH 259

  Fly   190 -------------AKLSPG------ASAKKSGKE------------------------------- 204
                         |||||.      .|.||..||                               
plant   260 KTLDNREDKPLDDAKLSPVQKDCEILSKKKRNKERSKSSAIIIDSDDGEGKNMPESLQNENPVSD 324

  Fly   205 ------------QNGVAKKEEAKQQQKKKEKPEAKKEQPKAKEPA-----KQQPASKDP---RTI 249
                        |||.|...:.|:::.::|:.....|.|:.|:.|     :::..:|.|   ||:
plant   325 KGIKSSSDVLLSQNGDATLSKKKKKRDRREETTDVPECPEKKKQAIDKNIEKEAGTKKPLETRTL 389

  Fly   250 TGGVKIVDQVVGK--GEEAKQGKRVSVYYIGRLQSNNKTFDSLLKGKPFKFALGGGEVIKGWDVG 312
            :.||.|.|...||  |:.|.:||:||:.|.|:|:.....|||.|...|.:|.|||..||:|..:|
plant   390 SNGVIIEDIEKGKLDGKSAVKGKKVSILYTGKLKDTGNLFDSNLGEDPLRFRLGGENVIEGLSIG 454

  Fly   313 VAGMKVGGKRVITCPPHMAYGARGAPPKIGPNSTLVFEVE 352
            |.||:||.||.:..||.:.|..||...|:..::.||:|||
plant   455 VEGMRVGDKRRLIIPPALGYSKRGLKEKVPKSAWLVYEVE 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fkbp39NP_524364.2 FKBP_C 262..354 CDD:278674 41/93 (44%)
AT3G12340NP_187840.7 NPL 3..96 CDD:407672 23/92 (25%)
FKBP_C 406..494 CDD:395196 37/87 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0545
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 146 1.000 Inparanoid score I1749
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D402681at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5708
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.830

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